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Matrix information:
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ADAN-name: LSB1_1CKA-27.PDB
Scoring matrix: LSB1_1CKA-27_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 14.17
Foldx random average score for Saccharomyces cerevisiae: 15.335 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3207309
Proteins after random average filtering: 7178
Total fragments: 2036464
Proteins after disorder filtering: 4753
Total fragments: 154413
Proteins after pattern filtering: 2307
Total fragments: 22043
Proteins after MINT filtering: 28
Total fragments: 752
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
14.17
|
8.96 |
0.00 |
| Best peptides |
RRPGDHIRR |
0.00
|
-2.62 |
-11.57 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
FEKGPRMPS |
5.68
|
-6.25 |
-15.21 |
|
SPPPLPTRR |
8.24
|
0.94 |
-8.02 |
|
KGPRMPSRG |
8.82
|
0.78 |
-8.18 |
| P53120 |
RSYEPECPV |
10.49
|
1.15 |
-7.80 |
|
SYEPECPVA |
12.26
|
1.89 |
-7.07 |
|
TRSYEPECP |
15.32
|
2.07 |
-6.88 |
| Q04322 |
STPPTLPPR |
8.64
|
1.19 |
-7.77 |
|
TSPPLPPRA |
8.80
|
-0.94 |
-9.89 |
|
SSTPPTLPP |
10.12
|
0.31 |
-8.64 |
| Q12168 |
RGPPPLPPR |
5.65
|
-2.52 |
-11.48 |
|
NRGPPPLPP |
7.08
|
-2.32 |
-11.28 |
|
GPPPLPPRA |
7.51
|
-1.92 |
-10.88 |
| P53169 |
MPTLPPRPY |
9.85
|
-2.34 |
-11.30 |
|
NSVPIMPTL |
10.42
|
1.28 |
-7.67 |
|
SVPIMPTLP |
10.68
|
7.12 |
-1.84 |
| Q12344 |
SSPPLPPRQ |
7.22
|
-0.35 |
-9.30 |
|
STSPKLPPR |
8.00
|
0.70 |
-8.26 |
|
TSSPPLPPR |
9.94
|
-0.52 |
-9.47 |
| Q07533 |
NPLPPLPPL |
8.04
|
-1.53 |
-10.48 |
|
NSAPNLPLA |
8.81
|
-0.36 |
-9.31 |
|
MNNPLPPLP |
9.04
|
-1.29 |
-10.25 |
| P53238 |
KPAGRPIPP |
7.30
|
-5.44 |
-14.40 |
|
GRPIPPAPT |
7.33
|
1.40 |
-7.55 |
|
RPIPPAPTH |
9.34
|
-1.24 |
-10.20 |
| P08417 |
LMLPENEPG |
9.37
|
0.26 |
-8.70 |
|
MLPENEPGS |
12.63
|
1.81 |
-7.14 |
|
LPENEPGSS |
15.18
|
1.81 |
-7.14 |
| P39521 |
DAQPKPKPA |
9.64
|
-0.16 |
-9.12 |
|
PHVPDRPPS |
9.78
|
-0.61 |
-9.56 |
|
QPKPKPAQD |
10.43
|
0.53 |
-8.43 |
| P04050 |
LPVPPPPVR |
9.55
|
-1.10 |
-10.06 |
|
YSPGSPAYS |
10.01
|
-1.71 |
-10.66 |
|
SSPGFSPTS |
10.06
|
-0.85 |
-9.80 |
| P40453 |
LRKRPPPPP |
5.86
|
-3.63 |
-12.59 |
|
RKRPPPPPP |
6.39
|
-2.74 |
-11.70 |
|
WKPPDLPIR |
7.17
|
-2.41 |
-11.37 |
| P19812 |
EPRPRRIPP |
7.07
|
-0.95 |
-9.90 |
|
PRPRRIPPT |
8.25
|
0.52 |
-8.44 |
|
HSPIFRPGN |
8.56
|
-3.36 |
-12.32 |
| Q03780 |
RSRPPPPPM |
6.19
|
-2.34 |
-11.30 |
|
SRPPPPPMD |
6.54
|
-0.49 |
-9.45 |
|
KRSRPPPPP |
7.56
|
-3.02 |
-11.98 |
| P48582 |
QGPGIPPRT |
5.37
|
-3.28 |
-12.23 |
|
LPQGPGIPP |
7.16
|
-5.50 |
-14.46 |
|
MAAPPVPPK |
8.29
|
-1.05 |
-10.01 |
| P53933 |
RRRPPPPPI |
4.61
|
-2.51 |
-11.47 |
|
RRPPPPPIP |
5.25
|
-1.72 |
-10.68 |
|
RPPPPPIPS |
5.56
|
-4.38 |
-13.34 |
| Q08229 |
RPLPSTPNE |
9.28
|
0.80 |
-8.15 |
|
NPTIPPRSK |
9.58
|
-5.67 |
-14.63 |
|
NDYNPTIPP |
10.37
|
-3.11 |
-12.07 |
| P33338 |
WSGPLTPPT |
9.05
|
-0.72 |
-9.68 |
|
ARTPARTPT |
9.42
|
1.63 |
-7.33 |
|
SWSGPLTPP |
9.58
|
-2.74 |
-11.70 |
| P32893 |
NGTIPNSPL |
9.79
|
5.04 |
-3.92 |
| Q12446 |
RRGPAPPPP |
5.94
|
-1.33 |
-10.29 |
|
GRRGPAPPP |
6.25
|
-4.83 |
-13.79 |
|
APPPPPRRG |
6.54
|
-1.86 |
-10.82 |
| P40483 |
SKPSVPPRN |
9.02
|
0.70 |
-8.26 |
|
ASKPSVPPR |
9.18
|
0.60 |
-8.36 |
|
KDAPASKPS |
10.58
|
-1.08 |
-10.04 |
| P39940 |
WDDPRLPSS |
9.55
|
0.46 |
-8.49 |
|
DDPRLPSSL |
12.56
|
2.63 |
-6.33 |
|
PRLPSSLDQ |
12.67
|
2.46 |
-6.50 |
| P38266 |
MPPPKPFRH |
5.69
|
-1.38 |
-10.34 |
|
QPPPKPFRR |
6.12
|
-0.24 |
-9.20 |
|
LPPPKPFRH |
6.19
|
-0.44 |
-9.39 |
| Q04659 |
QKDPTVPNG |
12.16
|
1.71 |
-7.25 |
|
SVQKDPTVP |
13.77
|
1.83 |
-7.13 |
|
PTVPNGLDG |
14.14
|
2.10 |
-6.86 |
| P40563 |
RRAPPPVPK |
7.28
|
-2.48 |
-11.44 |
|
RAPPPVPKK |
7.89
|
-1.19 |
-10.15 |
|
PSERPKRRA |
9.10
|
-1.46 |
-10.41 |
| P00812 |
GVDPLYIPA |
9.57
|
-0.43 |
-9.38 |
|
KDVPHCPES |
12.08
|
1.51 |
-7.45 |
|
PHCPESLKW |
13.66
|
0.11 |
-8.85 |
| Q04195 |
RAPPPTNPD |
8.66
|
-1.86 |
-10.82 |
|
LPQNVPIRT |
9.20
|
-1.42 |
-10.38 |
|
NEPIQFPFP |
9.45
|
-3.10 |
-12.06 |
| P43582 |
WPRPKGPPP |
7.85
|
-1.74 |
-10.70 |
|
RPKGPPPGV |
7.92
|
-4.58 |
-13.54 |
|
SNPPQVPSG |
11.23
|
2.21 |
-6.75 |
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