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Matrix information:
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ADAN-name: LSB1_1CKA-13.PDB
Scoring matrix: LSB1_1CKA-13_mat
Uniprot code: P53281
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 13.87
Foldx random average score for Saccharomyces cerevisiae: 11.284 Available information for P53281 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 53
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214487
Proteins after random average filtering: 7178
Total fragments: 1382486
Proteins after disorder filtering: 4491
Total fragments: 63826
Proteins after pattern filtering: 2175
Total fragments: 11096
Proteins after MINT filtering: 27
Total fragments: 408
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
13.87
|
-2.83 |
0.00 |
| Best peptides |
RFRRHRKK |
0.00
|
-4.30 |
-1.47 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q06604 |
LPTRPNKA |
3.91
|
-7.77 |
-4.94 |
|
GPRMPSRG |
7.03
|
-7.22 |
-4.39 |
|
KPLLPTRP |
7.87
|
-9.45 |
-6.62 |
| P53120 |
YEPECPVA |
8.65
|
-4.03 |
-1.21 |
|
EPECPVAY |
9.00
|
-5.53 |
-2.71 |
|
RSYEPECP |
9.05
|
-5.95 |
-3.13 |
| Q04322 |
SPPLPPRA |
7.16
|
-7.65 |
-4.83 |
|
PPTLPPRR |
8.77
|
-8.02 |
-5.19 |
|
PPLPPRAD |
9.68
|
-5.21 |
-2.38 |
| Q12168 |
PPPLPPRA |
6.95
|
-7.21 |
-4.38 |
|
NRGPPPLP |
9.16
|
-7.60 |
-4.77 |
|
VPNRPGGT |
9.33
|
-6.39 |
-3.56 |
| P53169 |
MPTLPPRP |
6.63
|
-8.75 |
-5.92 |
|
VPIMPTLP |
8.00
|
-8.56 |
-5.74 |
|
SVPIMPTL |
9.69
|
-3.72 |
-0.90 |
| Q12344 |
SPKLPPRG |
7.42
|
-8.10 |
-5.27 |
|
SPPLPPRQ |
8.92
|
-6.98 |
-4.16 |
|
PPLPPRQN |
10.46
|
-5.92 |
-3.09 |
| Q07533 |
LPPLPDLD |
5.59
|
-9.36 |
-6.53 |
|
IPPVPSRY |
6.19
|
-7.16 |
-4.34 |
|
LPPLPPLP |
6.23
|
-10.27 |
-7.44 |
| P53238 |
IPPAPTHY |
4.93
|
-6.00 |
-3.17 |
|
RPIPPAPT |
6.47
|
-6.92 |
-4.09 |
|
KPAGRPIP |
10.44
|
-7.27 |
-4.44 |
| P08417 |
MLPENEPG |
9.47
|
-3.20 |
-0.38 |
|
LPENEPGS |
10.94
|
-2.89 |
-0.06 |
| P39521 |
AQPKPKPA |
9.76
|
-5.22 |
-2.39 |
|
VQTPHVPD |
10.04
|
-1.20 |
1.63 |
|
VPDRPPSQ |
10.09
|
-6.17 |
-3.34 |
| P04050 |
LPVPPPPV |
7.74
|
-6.90 |
-4.08 |
|
PPVRPSIS |
8.35
|
-6.69 |
-3.87 |
|
APTSPGFG |
8.67
|
-6.72 |
-3.89 |
| P40453 |
PPPLPPKI |
5.21
|
-6.95 |
-4.13 |
|
RPPPPPPV |
5.58
|
-8.13 |
-5.31 |
|
RKRPPPPP |
7.48
|
-7.45 |
-4.63 |
| P19812 |
RPRRIPPT |
5.52
|
-7.91 |
-5.09 |
|
PRRIPPTD |
9.33
|
-4.97 |
-2.14 |
|
APQNPPPI |
9.47
|
-5.24 |
-2.42 |
| Q03780 |
RPPPPPMD |
5.10
|
-9.73 |
-6.91 |
|
APDIPPRS |
7.48
|
-6.26 |
-3.43 |
|
RSRPPPPP |
8.82
|
-6.57 |
-3.75 |
| P48582 |
APPLPPLD |
6.45
|
-9.21 |
-6.39 |
|
APPVPPKQ |
7.38
|
-6.32 |
-3.50 |
|
RNTPPQPS |
7.44
|
-5.46 |
-2.63 |
| P53933 |
RRPPPPPI |
6.21
|
-7.54 |
-4.71 |
|
RVAPPPLP |
6.47
|
-9.23 |
-6.41 |
|
RPPPPPIP |
6.68
|
-10.19 |
-7.36 |
| Q08229 |
NPTIPPRS |
6.69
|
-6.62 |
-3.79 |
|
RPLPSTPN |
7.93
|
-4.87 |
-2.04 |
|
YNPTIPPR |
9.67
|
-3.97 |
-1.15 |
| P33338 |
RTPARTPT |
8.68
|
-4.38 |
-1.55 |
|
RTPTPTPP |
9.42
|
-5.50 |
-2.67 |
|
TPTPPVVA |
9.49
|
-6.30 |
-3.47 |
| P43582 |
RPKGPPPG |
6.59
|
-7.98 |
-5.16 |
|
WPRPKGPP |
9.73
|
-5.33 |
-2.50 |
|
NPPQVPSG |
10.96
|
-3.89 |
-1.06 |
| P40483 |
KPSVPPRN |
6.85
|
-6.88 |
-4.05 |
|
APASKPSV |
10.68
|
-3.08 |
-0.25 |
| P39940 |
DPRLPSSL |
9.18
|
-7.06 |
-4.23 |
|
PRLPSSLD |
10.69
|
-4.50 |
-1.67 |
|
WDDPRLPS |
11.13
|
-2.91 |
-0.08 |
| P38266 |
YPIEPSLD |
5.86
|
-7.87 |
-5.04 |
|
FPPPPLKP |
6.03
|
-7.88 |
-5.05 |
|
LPPPPTHR |
6.17
|
-6.39 |
-3.56 |
| Q04659 |
DPTVPNGL |
10.79
|
-5.23 |
-2.41 |
| P40563 |
RRAPPPVP |
7.21
|
-8.13 |
-5.31 |
|
RAPPPVPK |
7.54
|
-6.84 |
-4.01 |
|
PPPVPKKP |
7.86
|
-6.44 |
-3.62 |
| P00812 |
VPHCPESL |
9.48
|
-5.31 |
-2.48 |
|
PLYIPATG |
9.79
|
-4.51 |
-1.68 |
|
NKDVPHCP |
10.51
|
-5.35 |
-2.52 |
| Q04195 |
HPSEPIII |
8.99
|
-7.30 |
-4.47 |
|
TPVLPTLP |
9.20
|
-9.45 |
-6.62 |
|
LPTLPQNV |
9.64
|
-7.52 |
-4.69 |
| Q12446 |
PPPPHRHV |
5.44
|
-3.29 |
-0.46 |
|
LPDPPQHN |
5.79
|
-6.81 |
-3.98 |
|
LPQLPNRN |
6.34
|
-8.08 |
-5.25 |
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