ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BZZ1-D2_2A28-21.PDB
Scoring matrix: BZZ1-D2_2A28-21_mat
Uniprot code: P38822
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 16.13
Foldx random average score for Saccharomyces cerevisiae: 14.347

Available information for P38822 in MINT (Nov 2008):
Nš of interacting proteins: 129
 Proteins belonging to other specie: 0
Nš of interactions described: 162
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199739
Proteins after random average filtering: 7178
 Total fragments: 1979525
Proteins after disorder filtering: 4427
 Total fragments: 76211
Proteins after pattern filtering: 1727
 Total fragments: 4511
Proteins after MINT filtering: 36
 Total fragments: 157


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

16.13

0.85

0.00

Best peptides

RWRLGIPQMH

0.00

-0.94

-1.79

         
Interactors      
Q06604

PLLPTRPNKA

11.20

-1.64

-2.49

EKGPRMPSRG

11.35

-1.95

-2.80

PTRPNKAEVT

11.40

-1.18

-2.03

P24814

IHPNLGPQLW

10.25

-1.10

-1.95

HPNLGPQLWL

10.31

-3.07

-3.92

HPPDIHPNLG

13.97

-1.31

-2.16

P32571

INYPETPHLW

11.52

-3.32

-4.17

NYPETPHLWK

13.90

-3.79

-4.64

Q06412

PKSPRDSSKQ

12.44

-0.85

-1.70

PNSPKSPRDS

13.85

-2.35

-3.20

PPPPLSTSRN

14.24

-4.35

-5.20

P32578

VHPQEPPSFT

11.23

-2.66

-3.51

LHPLHPIIND

13.16

-2.96

-3.81

VERPSTPFSD

13.62

-0.49

-1.34

Q12451

LLPWLPPTDT

13.25

-2.18

-3.03

P15891

ATPEKKPKEN

13.14

-0.30

-1.15

DEPEGEPDVK

13.60

0.34

-0.51

TPSPAPAAKI

14.16

-1.81

-2.66

P17555

PRPKKPSTLK

10.55

-3.15

-4.00

PKKPSTLKTK

11.86

-3.26

-4.11

PPRPKKPSTL

12.48

-1.61

-2.46

P47075

RKPPLPTNIE

12.82

-1.71

-2.56

PPLPTNIEIT

12.82

-1.03

-1.88

P24276

PPPPNAHQGH

10.57

-2.76

-3.61

NKPPQSPKIA

11.90

-2.28

-3.13

P53080

PSSPSSTTTL

10.77

-2.51

-3.36

HSPPSSPSST

13.22

-0.36

-1.21

P89495

TIPPLPTTIH

8.90

-3.98

-4.83

PTSPLVTLSH

9.63

-3.49

-4.34

SHYPTSPLVT

11.40

-2.04

-2.89

P40096

QLPPIKPEHE

13.15

-1.31

-2.16

LPPIKPEHEV

13.42

-1.79

-2.64

P36125

PAGPQGQRRR

12.28

-5.77

-6.62

NDLPAGPQGQ

13.03

-0.60

-1.45

P36006

MGQPKDPKFE

12.20

-1.47

-2.32

NKKPKNPGGL

13.19

-1.75

-2.60

KKPKNPGGLS

13.37

-2.35

-3.20

P32790

IKPPRPTSTT

12.63

-1.93

-2.78

PPRPTSTTSV

12.64

-1.52

-2.37

TTVPAAPVSS

12.76

-2.24

-3.09

P53939

SQPGSLPTTM

12.00

-2.51

-3.36

KLPKSQPGSL

12.39

-2.21

-3.06

NPIIIPDSQD

13.50

-2.63

-3.48

P25614

LSNPCQPAGI

13.99

-1.39

-2.24

P32505

PKPPGTCEFL

11.20

-2.05

-2.90

CSNPSCPFGH

11.34

-1.63

-2.48

SCPHAHPTKV

11.76

-2.13

-2.98

P53933

VSYPGNPTSR

9.72

-2.54

-3.39

PPPPIPSTQK

13.22

-2.51

-3.36

APPPLPNRQL

13.95

-1.95

-2.80

P32386

IPPPQWPQDG

13.78

0.16

-0.69

P40020

SEEPTSPTRQ

9.96

-1.94

-2.79

TSAPSIPVEH

10.20

-3.17

-4.02

PPYLSPQNKD

11.76

-2.28

-3.13

Q04439

SSKPKEPMFE

10.48

-3.05

-3.90

NNIPTPPQNR

11.34

-3.30

-4.15

PPPPGMQNKA

11.95

-2.21

-3.06

P40187

DEPLNLPNNS

12.75

-1.28

-2.13

P35193

HEDPVSPKAG

13.57

-0.55

-1.40

P39940

WDDPRLPSSL

13.98

-0.17

-1.02

P38266

PPPLKPGQKT

9.43

-3.86

-4.71

PLKPGQKTYT

9.60

-2.44

-3.29

KKPPVVPKKK

10.78

-2.65

-3.50

P53264

SSRPKFPFEY

13.48

-0.76

-1.61

P46956

KNAPSVPQVD

10.46

-2.57

-3.42

PSVPQVDASL

13.97

-0.98

-1.83

Q7LHG5

PNFPIQPSLT

11.74

-2.91

-3.76

GYLPNTPAIK

12.02

-2.12

-2.97

NFPIQPSLTF

12.27

-4.41

-5.26

P00812

PHCPESLKWV

11.44

-2.65

-3.50

KDVPHCPESL

12.47

-0.57

-1.42

VDPLYIPATG

12.95

-3.19

-4.04

P37370

FSAPSLPQQS

9.92

-1.28

-2.13

ASAPKVPQNR

10.97

-1.72

-2.57

QNRPHMPSVR

11.37

-3.22

-4.07

Q12446

NNAPSQPQSN

10.75

-1.95

-2.80

RPLPQLPNRN

10.78

-3.57

-4.42

FPFPVPQQQF

11.64

-1.63

-2.48

P11792

PFKPHLVSET

12.54

-0.98

-1.83

IPPPFKPHLV

13.08

-2.25

-3.10

P47977

LMNPFLPSAH

10.08

-2.75

-3.60

P40453

WKPPDLPIRL

11.64

-3.24

-4.09

TKVPEPPSWK

12.40

-2.18

-3.03

PDLPIRLRKR

12.60

-3.19

-4.04

 


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