ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-5.PDB
Scoring matrix: BUD14_1SEM-5_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.57
Foldx random average score for Saccharomyces cerevisiae: 19.809

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199665
Proteins after random average filtering: 7177
 Total fragments: 1498605
Proteins after disorder filtering: 4648
 Total fragments: 124018
Proteins after pattern filtering: 2305
 Total fragments: 20919
Proteins after MINT filtering: 12
 Total fragments: 168


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

18.57

3.93

0.00

Best peptides

WPNNMRMHHW

0.00

-3.16

-7.09

         
Interactors      
P13186

IPAALPPSDM

11.74

-3.75

-7.68

APSYVPNRVP

12.03

-5.11

-9.04

PAALPPSDMT

12.28

-2.97

-6.90

Q12276

RPSTTPSHVV

8.60

-5.65

-9.58

PPQQLPSRKP

9.90

-6.27

-10.20

SPQRPLSGQN

13.18

-3.29

-7.22

P38853

KPFDTPTIQK

11.07

-4.34

-8.27

VPTDTPTPRN

11.70

-2.59

-6.52

APSPAPKDFS

13.19

-2.90

-6.83

P40095

IPVLPPPRSP

8.62

-4.18

-8.11

PPSSTFPDSP

9.65

-5.35

-9.28

PPRSPNRPTL

10.57

-5.40

-9.33

P53858

TPRVKPDSQG

12.09

-1.76

-5.69

KPSPPSSKLY

13.47

-4.38

-8.31

DPKPSPPSSK

13.81

-1.89

-5.82

P42073

RPPREPIEFD

9.76

-4.19

-8.12

LNKRPPREPI

12.98

-2.52

-6.45

P40036

LPPLSPKSTV

10.45

-5.05

-8.98

PPLSPKSTVP

11.06

-4.28

-8.21

LPTTPGIRSG

15.60

-0.81

-4.74

Q03016

PPQQLPSRTP

9.18

-5.79

-9.72

IPLLTPINSG

10.07

-2.21

-6.14

SPANPKILPK

10.33

1.22

-2.71

Q07807

FPFAYPNPMM

8.51

-5.70

-9.63

YPTPNPIPVK

10.12

-4.73

-8.66

SPSSPPNNSP

10.44

-3.38

-7.31

P40187

EPLNLPNNSA

13.19

-1.99

-5.92

GNPSPPIYKK

13.89

-1.94

-5.87

NGNPSPPIYK

14.71

-2.09

-6.02

P39960

NPATPNQKMR

12.47

-4.79

-8.72

FDPTLPASNS

15.24

0.32

-3.61

NNPATPNQKM

15.45

-2.19

-6.12

P26570

TPLNSPGLSK

11.71

-1.68

-5.61

TAYSTPLNSP

12.93

-1.99

-5.92

TPSKPNLEVN

13.05

-0.04

-3.97

 


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