ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-29.PDB
Scoring matrix: BUD14_1SEM-29_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.57
Foldx random average score for Saccharomyces cerevisiae: 13.766

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199665
Proteins after random average filtering: 7177
 Total fragments: 1320032
Proteins after disorder filtering: 3890
 Total fragments: 41242
Proteins after pattern filtering: 2032
 Total fragments: 11048
Proteins after MINT filtering: 12
 Total fragments: 97


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

20.57

-1.79

0.00

Best peptides

RRPMIFYFWH

0.00

-5.92

-4.13

         
Interactors      
P13186

KAPSYVPNRV

9.22

-7.30

-5.51

PMSPNYGNQS

11.47

-7.39

-5.60

PLTPLATNTH

11.57

-5.10

-3.31

Q12276

QLPSRKPKRG

8.53

-5.70

-3.91

DPPQQLPSRK

10.16

-6.56

-4.77

PPQQLPSRKP

10.65

-6.55

-4.76

P38853

KPFDTPTIQK

11.48

-6.93

-5.14

VPTDTPTPRN

12.28

-6.16

-4.37

DVPTDTPTPR

13.00

-4.22

-2.43

P40095

RIPVLPPPRS

9.31

-9.24

-7.45

PPPRSPNRPT

10.44

-5.37

-3.58

NRIPVLPPPR

11.01

-7.58

-5.79

P53858

YLPEFEPNRP

8.51

-6.55

-4.76

FEPNRPVSMS

10.12

-8.39

-6.60

SMTPDSPVKS

10.43

-5.24

-3.45

P42073

KRPPREPIEF

9.62

-3.01

-1.22

RPPREPIEFD

10.72

-5.18

-3.39

PREPIEFDLN

11.26

-6.46

-4.67

P40036

SLPTTPGIRS

7.21

-8.72

-6.93

ELPPLSPKST

9.30

-4.92

-3.13

FKIELPPLSP

13.19

-8.33

-6.54

Q03016

DPPQQLPSRT

10.34

-5.74

-3.95

NIPLLTPINS

10.39

-6.96

-5.17

QLPSRTPKKG

10.48

-4.67

-2.88

Q07807

TPNPIPVKMP

8.33

-9.54

-7.75

PMMFMPPPPL

9.83

-9.69

-7.90

PFPFAYPNPM

10.51

-7.48

-5.69

P40187

DEPLNLPNNS

10.04

-7.07

-5.28

GNPSPPIYKK

10.90

-6.17

-4.38

NGNPSPPIYK

12.02

-4.37

-2.58

P39960

NNPATPNQKM

10.98

-7.12

-5.33

FDPTLPASNS

11.05

-6.94

-5.15

PATPNQKMRD

12.55

-3.87

-2.08

P26570

DPTDSPNEWE

10.60

-3.97

-2.18

PDPSTPSKPN

10.84

-5.69

-3.90

MEPKSPILKT

10.85

-6.53

-4.74

 


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