ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-28.PDB
Scoring matrix: BUD14_1SEM-28_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.27
Foldx random average score for Saccharomyces cerevisiae: 15.880

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199665
Proteins after random average filtering: 7178
 Total fragments: 1701514
Proteins after disorder filtering: 4195
 Total fragments: 44468
Proteins after pattern filtering: 2017
 Total fragments: 8698
Proteins after MINT filtering: 12
 Total fragments: 89


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

20.27

1.23

0.00

Best peptides

RRRYIKLPWQ

0.00

-3.04

-4.27

         
Interactors      
P13186

IPAALPPSDM

11.31

-3.24

-4.47

QNNIPLTPLA

13.28

-4.25

-5.48

IPMSPNYGNQ

13.46

-1.99

-3.22

Q12276

RRPSTTPSHV

11.45

-3.14

-4.37

DPPQQLPSRK

12.69

-2.78

-4.01

ASPQRPLSGQ

12.91

-2.88

-4.11

P38853

NKPFDTPTIQ

11.24

-2.43

-3.66

PFDTPTIQKE

13.65

-3.38

-4.61

ATPVTPTSHQ

14.29

-0.84

-2.07

P40095

RIPVLPPPRS

10.94

-6.17

-7.40

PPRSPNRPTL

13.02

-3.16

-4.39

FPDSPSSSSL

13.15

-2.39

-3.62

P53858

KPSPPSSKLY

12.68

-3.24

-4.47

TPRVKPDSQG

12.96

-3.45

-4.68

PKPSPPSSKL

13.18

-2.42

-3.65

P42073

RPPREPIEFD

10.69

-0.99

-2.22

PPREPIEFDL

11.54

-3.75

-4.98

PREPIEFDLN

11.86

-3.94

-5.17

P40036

KIELPPLSPK

11.77

-3.70

-4.93

LPPLSPKSTV

13.15

-1.48

-2.71

SKSLPTTPGI

13.26

-2.10

-3.33

Q03016

TASKPQTPIL

12.05

-2.90

-4.13

SLFSPANPKI

12.13

-5.78

-7.01

LFSPANPKIL

12.74

-2.86

-4.09

Q07807

YPTPNPIPVK

10.32

-3.12

-4.35

PFAYPNPMMF

10.56

-4.33

-5.56

FPFAYPNPMM

12.05

-7.68

-8.91

P40187

GNPSPPIYKK

12.76

-3.18

-4.41

ENGNPSPPIY

13.66

-2.41

-3.64

EPLNLPNNSA

13.82

-4.42

-5.65

P39960

NPATPNQKMR

12.82

-3.59

-4.82

KFFDPTLPAS

14.63

-2.37

-3.60

NNPATPNQKM

14.68

-4.32

-5.55

P26570

PLNSPGLSKL

12.67

-5.45

-6.68

TPSKPNLEVN

13.43

-2.95

-4.18

DPTDSPNEWE

13.46

-2.49

-3.72

 


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