ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-26.PDB
Scoring matrix: BUD14_1SEM-26_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 16.8
Foldx random average score for Saccharomyces cerevisiae: 12.218

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1461041
Proteins after disorder filtering: 4425
 Total fragments: 66734
Proteins after pattern filtering: 2163
 Total fragments: 13902
Proteins after MINT filtering: 12
 Total fragments: 124


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

16.80

-1.42

0.00

Best peptides

SRRRRYRPQ

0.00

-4.19

-2.77

         
Interactors      
P13186

QEPLPEREP

7.40

-5.37

-3.95

FKAPSYVPN

8.43

-5.33

-3.91

SSIPMSPNY

8.59

-5.09

-3.67

Q12276

GTRPKILPK

6.82

-6.98

-5.56

SPQRPLSGQ

7.39

-5.07

-3.65

DPPQQLPSR

8.27

-5.53

-4.11

P38853

NKPFDTPTI

10.33

-5.47

-4.05

SNKPFDTPT

10.84

-1.94

-0.52

KPFDTPTIQ

10.89

-0.54

0.88

P40095

NRIPVLPPP

7.27

-9.01

-7.59

NNRIPVLPP

8.75

-6.49

-5.07

PPRSPNRPT

9.24

-2.87

-1.45

P53858

FEPNRPVSM

8.88

-3.38

-1.96

PNRPVSMSF

9.00

-4.64

-3.22

STPRVKPDS

9.70

-5.78

-4.36

P42073

RPPREPIEF

6.76

-6.56

-5.14

LNKRPPREP

7.36

-7.20

-5.78

KRPPREPIE

9.26

-6.03

-4.61

P40036

PTTPGIRSG

9.00

-5.73

-4.31

KIELPPLSP

10.54

-5.00

-3.58

ELPPLSPKS

11.71

-4.98

-3.56

Q03016

DNIPLLTPI

7.87

-4.07

-2.65

DPPQQLPSR

8.27

-5.53

-4.11

PQQLPSRTP

8.65

-4.76

-3.34

Q07807

PTPNPIPVK

8.00

-5.81

-4.39

NPIPVKMPK

8.15

-5.74

-4.32

PFPFAYPNP

8.28

-6.81

-5.39

P40187

DEPLNLPNN

8.12

-6.49

-5.07

MDEPLNLPN

10.56

-5.16

-3.74

GNPSPPIYK

10.71

-3.91

-2.49

P39960

FFDPTLPAS

10.95

-6.13

-4.71

MLINNPATP

11.45

-4.55

-3.13

INNPATPNQ

11.50

-5.03

-3.61

P26570

EPKSPILKT

8.76

-6.67

-5.25

MEPKSPILK

8.96

-4.85

-3.43

STPLNSPGL

9.90

-4.28

-2.86

 


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