ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-23.PDB
Scoring matrix: BUD14_1SEM-23_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.98
Foldx random average score for Saccharomyces cerevisiae: 9.925

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3221199
Proteins after random average filtering: 7178
 Total fragments: 1539958
Proteins after disorder filtering: 4543
 Total fragments: 58420
Proteins after pattern filtering: 1936
 Total fragments: 7468
Proteins after MINT filtering: 12
 Total fragments: 72


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

12.98

-2.23

0.00

Best peptides

RPLWPRF

0.00

-7.66

-5.43

         
Interactors      
P13186

RPPIPAA

6.71

-5.70

-3.47

NIPLTPL

7.19

-5.41

-3.18

IPLTPLA

7.97

-5.57

-3.34

Q12276

RPKILPK

5.36

-5.59

-3.36

PSRKPKR

7.37

-5.37

-3.14

PQQLPSR

8.14

-4.60

-2.37

P38853

NKPFDTP

8.20

-6.40

-4.17

KPFDTPT

9.92

-2.23

0.00

P40095

IPVLPPP

6.67

-5.72

-3.49

RIPVLPP

8.24

-5.41

-3.18

RSPNRPT

9.08

-5.00

-2.77

P53858

EDPKPSP

7.78

-4.59

-2.36

LPEFEPN

8.44

-5.40

-3.17

TPRVKPD

9.00

-3.95

-1.72

P42073

RPPREPI

7.04

-4.41

-2.18

PPREPIE

9.11

-2.19

0.04

P40036

LPPLSPK

6.13

-6.06

-3.83

PPLSPKS

8.82

-4.93

-2.70

LPTTPGI

9.44

-5.30

-3.07

Q03016

IPLLTPI

4.86

-7.11

-4.88

HPPISSP

6.31

-5.26

-3.03

NPKILPK

6.46

-4.16

-1.93

Q07807

NTPVFRP

7.38

-4.79

-2.56

PPPLSAP

7.69

-5.49

-3.26

PNPIPVK

7.73

-5.34

-3.11

P40187

EPLNLPN

7.71

-6.08

-3.85

DEPLNLP

8.58

-4.63

-2.40

PLNLPNN

8.80

-3.94

-1.71

P39960

DPTLPAS

9.58

-4.29

-2.06

P26570

MEPKSPI

8.06

-4.69

-2.46

EPKSPIL

8.51

-3.85

-1.62

STPLNSP

9.11

-4.74

-2.51

 


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