ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1SEM-16.PDB
Scoring matrix: BUD14_1SEM-16_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 23.97
Foldx random average score for Saccharomyces cerevisiae: 19.703

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1481076
Proteins after disorder filtering: 4619
 Total fragments: 102955
Proteins after pattern filtering: 2085
 Total fragments: 8816
Proteins after MINT filtering: 12
 Total fragments: 86


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

23.97

4.11

0.00

Best peptides

MFPIWHKRN

0.00

-0.06

-4.17

         
Interactors      
P13186

IPMSPNYGN

13.34

-1.93

-6.04

QEPLPEREP

14.91

0.16

-3.95

NSSIPMSPN

15.71

0.04

-4.07

Q12276

LPSRKPKRG

13.09

-3.04

-7.15

PPQQLPSRK

16.50

-1.08

-5.19

RRPSTTPSH

17.45

-0.05

-4.16

P38853

PTDTPTPRN

17.03

0.58

-3.53

APSPAPKDF

17.24

-2.30

-6.41

PFDTPTIQK

18.29

-1.04

-5.15

P40095

IPVLPPPRS

15.07

-2.91

-7.02

PPPRSPNRP

16.31

-2.45

-6.56

RSPNRPTLS

16.40

-0.12

-4.23

P53858

YLPEFEPNR

13.97

-0.68

-4.79

LPEFEPNRP

14.45

-2.73

-6.84

FEPNRPVSM

16.27

-0.59

-4.70

P42073

RPPREPIEF

12.39

-1.68

-5.79

LNKRPPREP

16.93

-2.19

-6.30

KRPPREPIE

17.02

0.59

-3.52

P40036

LPTTPGIRS

13.76

0.06

-4.05

Q03016

HPPISSPSN

11.95

0.50

-3.61

PSRTPKKGN

15.11

-2.22

-6.33

KPSRPSTSP

17.09

-2.20

-6.31

Q07807

PFAYPNPMM

13.61

0.46

-3.65

TPVFRPSNN

13.96

-3.92

-8.03

YYPTPNPIP

15.47

0.57

-3.54

P40187

PLNLPNNSA

15.85

-0.74

-4.85

MDEPLNLPN

16.42

0.15

-3.96

DEPLNLPNN

17.32

1.14

-2.97

P39960

NPATPNQKM

13.27

-0.40

-4.51

PATPNQKMR

17.19

1.33

-2.78

FDPTLPASN

17.25

0.40

-3.71

P26570

TPSKPNLEV

15.18

2.27

-1.84

DPSTPSKPN

15.18

0.03

-4.08

DPTDSPNEW

16.11

-0.05

-4.16

 


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