ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-26.PDB
Scoring matrix: BUD14_1GCQ-26_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 19.17
Foldx random average score for Saccharomyces cerevisiae: 12.962

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1714077
Proteins after disorder filtering: 4538
 Total fragments: 89699
Proteins after pattern filtering: 2236
 Total fragments: 18371
Proteins after MINT filtering: 12
 Total fragments: 175


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

19.17

-1.76

0.00

Best peptides

RRRRFYIYQ

0.00

-4.47

-2.71

         
Interactors      
P13186

FKAPSYVPN

7.11

-7.66

-5.90

NSSIPMSPN

7.68

-5.84

-4.08

QNNIPLTPL

8.58

-6.10

-4.34

Q12276

SPQRPLSGQ

4.50

-7.38

-5.62

GTRPKILPK

6.53

-5.47

-3.71

SDPPQQLPS

7.84

-4.02

-2.26

P38853

SNKPFDTPT

8.76

-1.42

0.34

PYVPSESSQ

9.78

-4.17

-2.41

MDVPTDTPT

10.38

-3.72

-1.96

P40095

NRIPVLPPP

6.46

-8.66

-6.90

VLPPPRSPN

7.28

-5.30

-3.54

NNRIPVLPP

7.94

-5.55

-3.79

P53858

STPRVKPDS

6.59

-5.41

-3.65

EPNRPVSMS

7.59

-5.27

-3.51

DPKPSPPSS

8.85

-4.42

-2.66

P42073

RPPREPIEF

7.67

-3.95

-2.19

NKRPPREPI

7.92

-1.30

0.46

LNKRPPREP

8.11

-6.95

-5.19

P40036

IELPPLSPK

7.65

-6.37

-4.61

LPPLSPKST

9.21

-4.95

-3.19

KIELPPLSP

9.82

-3.76

-2.00

Q03016

DNIPLLTPI

6.44

-7.07

-5.31

SDPPQQLPS

7.84

-4.02

-2.26

NTKPSRPST

7.95

-4.64

-2.88

Q07807

NPIPVKMPK

6.01

-5.97

-4.21

MPPPPLSAP

7.53

-6.48

-4.72

MFMPPPPLS

8.17

-6.54

-4.78

P40187

DEPLNLPNN

8.86

-6.73

-4.97

GNPSPPIYK

10.28

-3.74

-1.98

MDEPLNLPN

10.28

-4.50

-2.74

P39960

FFDPTLPAS

9.08

-6.91

-5.15

MLINNPATP

12.21

-6.04

-4.28

PATPNQKMR

12.22

-3.83

-2.07

P26570

MEPKSPILK

7.57

-4.69

-2.93

EPKSPILKT

8.11

-4.56

-2.80

PKSPILKTN

8.55

-5.95

-4.19

 


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