ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-21.PDB
Scoring matrix: BUD14_1GCQ-21_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 17.79
Foldx random average score for Saccharomyces cerevisiae: 15.339

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199665
Proteins after random average filtering: 7177
 Total fragments: 1848547
Proteins after disorder filtering: 4410
 Total fragments: 59445
Proteins after pattern filtering: 1716
 Total fragments: 4219
Proteins after MINT filtering: 13
 Total fragments: 45


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

17.79

0.11

0.00

Best peptides

EKRFGRPTMM

0.00

-3.42

-3.53

         
Interactors      
P13186

PMSPNYGNQS

12.53

-2.94

-3.05

SIPMSPNYGN

13.84

-4.52

-4.63

NIPLTPLATN

13.92

-3.16

-3.27

Q12276

PQRPLSGQNV

12.15

-3.09

-3.20

RRPSTTPSHV

13.25

-1.90

-2.01

DPPQQLPSRK

13.76

-2.79

-2.90

P38853

NKPFDTPTIQ

8.03

-6.44

-6.55

PYVPSESSQT

9.98

-1.71

-1.82

APSPAPKDFS

12.71

-3.82

-3.93

P41818

PKTPYQGAVD

12.80

-3.62

-3.73

P40095

PRSPNRPTLS

8.03

-4.32

-4.43

P53858

EFEPNRPVSM

11.55

-2.38

-2.49

TPRVKPDSQG

11.96

-4.07

-4.18

SMTPDSPVKS

12.95

-3.48

-3.59

P42073

PREPIEFDLN

8.22

-5.44

-5.55

KRPPREPIEF

12.23

-4.07

-4.18

RPPREPIEFD

14.88

-3.18

-3.29

P40036

KSLPTTPGIR

12.69

-3.58

-3.69

ELPPLSPKST

13.04

-2.51

-2.62

PTTPGIRSGN

14.94

-1.64

-1.75

Q03016

LFSPANPKIL

10.81

-3.10

-3.21

NIPLLTPINS

12.18

-4.11

-4.22

HPPISSPSNA

12.32

-2.68

-2.79

Q07807

NTPVFRPSNN

13.42

-2.58

-2.69

PFAYPNPMMF

14.68

-5.14

-5.25

P40187

DEPLNLPNNS

13.51

-3.27

-3.38

NGNPSPPIYK

15.33

-3.55

-3.66

P39960

INNPATPNQK

12.02

-4.43

-4.54

FFDPTLPASN

13.21

-3.19

-3.30

PATPNQKMRD

13.70

-3.48

-3.59

P26570

PKSPILKTNN

9.74

-4.66

-4.77

PSTPSKPNLE

12.73

-3.03

-3.14

STPLNSPGLS

13.98

-3.72

-3.83

 


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