ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-2.PDB
Scoring matrix: BUD14_1GCQ-2_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 17.74
Foldx random average score for Saccharomyces cerevisiae: 20.059

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199665
Proteins after random average filtering: 7176
 Total fragments: 1452427
Proteins after disorder filtering: 4623
 Total fragments: 140862
Proteins after pattern filtering: 2288
 Total fragments: 23213
Proteins after MINT filtering: 13
 Total fragments: 203


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

17.74

10.04

0.00

Best peptides

SSKDFFPKKY

0.00

5.13

-4.91

         
Interactors      
P13186

SSIPMSPNYG

9.79

4.50

-5.54

RNSSIPMSPN

12.14

-2.09

-12.13

FKAPSYVPNR

12.59

2.24

-7.80

Q12276

SKISTPTSTP

11.09

1.74

-8.30

QQLPSRKPKR

12.03

2.43

-7.61

PPQQLPSRKP

13.18

-2.91

-12.95

P38853

SAPSPAPKDF

9.27

2.20

-7.84

SNKPFDTPTI

11.29

5.04

-5.00

ASAPSPAPKD

12.90

1.47

-8.57

P41818

PKTPYQGAVD

17.06

4.15

-5.89

P40095

SSPTPAPSSG

10.16

3.16

-6.88

SSSPTPAPSS

11.16

3.37

-6.67

PSSTFPDSPS

11.20

-0.27

-10.31

P53858

SMTPDSPVKS

9.51

2.54

-7.50

PKPSPPSSKL

12.96

-0.77

-10.81

AYLPEFEPNR

13.80

3.86

-6.18

P42073

NKRPPREPIE

16.35

3.63

-6.41

KRPPREPIEF

17.34

2.86

-7.18

PREPIEFDLN

19.02

1.84

-8.20

P40036

FKIELPPLSP

13.26

0.32

-9.72

IELPPLSPKS

14.88

2.39

-7.65

PPLSPKSTVP

17.11

-1.76

-11.80

Q03016

SRPSTSPASS

11.24

4.56

-5.48

SPANPKILPK

12.05

1.58

-8.46

QQLPSRTPKK

12.27

1.33

-8.71

Q07807

SSPSSPPNNS

7.07

2.35

-7.69

SSVSSPSSPP

7.33

1.07

-8.97

PNNSPFPFAY

7.94

-1.18

-11.22

P40187

SEENGNPSPP

8.41

2.05

-7.99

GNPSPPIYKK

12.02

-0.94

-10.98

ENGNPSPPIY

12.72

3.30

-6.74

P39960

NNPATPNQKM

13.58

-0.36

-10.40

SMLINNPATP

14.08

-0.18

-10.22

FDPTLPASNS

14.40

2.07

-7.97

P26570

SNVPDPSTPS

9.67

3.48

-6.56

SDPTDSPNEW

10.25

3.90

-6.14

STPSKPNLEV

11.84

2.56

-7.48

 


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