ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-15.PDB
Scoring matrix: BUD14_1GCQ-15_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 16.58
Foldx random average score for Saccharomyces cerevisiae: 10.930

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1395437
Proteins after disorder filtering: 3918
 Total fragments: 32158
Proteins after pattern filtering: 1511
 Total fragments: 4694
Proteins after MINT filtering: 12
 Total fragments: 57


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

16.58

0.83

0.00

Best peptides

HHFFIFKMM

0.00

-1.32

-2.16

         
Interactors      
P13186

IPLTPLATN

8.38

-4.72

-5.55

LPEREPPTY

8.97

-3.26

-4.09

APSYVPNRV

9.00

-5.01

-5.84

Q12276

SPQRPLSGQ

7.77

-2.46

-3.29

LPSRKPKRG

8.50

-3.12

-3.96

QLPSRKPKR

10.34

-1.75

-2.59

P38853

NKPFDTPTI

9.53

-3.70

-4.54

KPFDTPTIQ

9.98

-3.72

-4.55

P40095

IPVLPPPRS

10.18

-5.84

-6.67

SPNRPTLSD

10.68

-3.08

-3.92

PPPRSPNRP

10.70

-4.57

-5.41

P53858

FEPNRPVSM

8.52

-2.80

-3.63

FLSTPRVKP

9.12

-5.06

-5.89

LPEFEPNRP

9.16

-4.27

-5.10

P42073

KRPPREPIE

8.91

-3.01

-3.84

LNKRPPREP

10.03

-3.48

-4.31

RPPREPIEF

10.23

-2.23

-3.06

P40036

KIELPPLSP

10.12

-5.38

-6.21

LPPLSPKST

10.64

-3.86

-4.70

SLPTTPGIR

10.75

-2.88

-3.71

Q03016

LPSRTPKKG

8.16

-2.47

-3.31

NIPLLTPIN

8.19

-6.60

-7.43

HPPISSPSN

8.91

-6.71

-7.54

Q07807

PFAYPNPMM

6.25

-5.06

-5.89

MMFMPPPPL

8.38

-6.79

-7.63

TPVFRPSNN

9.02

-5.24

-6.08

P40187

DEPLNLPNN

9.46

-4.41

-5.25

PLNLPNNSA

10.08

-3.01

-3.84

P39960

NPATPNQKM

9.00

-3.64

-4.47

IKFFDPTLP

9.74

-5.04

-5.88

FFDPTLPAS

10.63

-2.13

-2.96

P26570

PKSPILKTN

9.54

-1.94

-2.77

MEPKSPILK

10.13

-3.99

-4.83

TPSKPNLEV

10.28

-2.91

-3.75

 


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