ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-14.PDB
Scoring matrix: BUD14_1GCQ-14_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.27
Foldx random average score for Saccharomyces cerevisiae: 11.699

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1521971
Proteins after disorder filtering: 4277
 Total fragments: 46888
Proteins after pattern filtering: 1871
 Total fragments: 5926
Proteins after MINT filtering: 12
 Total fragments: 67


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

17.27

-0.83

0.00

Best peptides

MWPIMNWIR

0.00

-2.88

-2.05

         
Interactors      
P13186

APSYVPNRV

8.70

-6.18

-5.35

IPMSPNYGN

9.53

-4.98

-4.15

NIPLTPLAT

9.73

-5.09

-4.26

Q12276

PSTTPSHVV

9.47

-3.46

-2.63

QLPSRKPKR

10.29

-2.35

-1.52

RPSTTPSHV

10.34

-3.98

-3.15

P38853

KPFDTPTIQ

7.69

-4.76

-3.93

TPVTPTSHQ

11.10

-3.68

-2.85

VPTDTPTPR

11.67

-3.57

-2.74

P40095

IPVLPPPRS

6.49

-6.95

-6.12

LPPPRSPNR

9.75

-2.61

-1.78

PPRSPNRPT

9.96

-4.83

-4.00

P53858

KPSPPSSKL

8.67

-4.53

-3.70

EPNRPVSMS

9.48

-5.70

-4.87

EDPKPSPPS

10.64

-1.73

-0.90

P42073

KRPPREPIE

9.71

-2.94

-2.11

PPREPIEFD

10.16

-4.48

-3.65

RPPREPIEF

10.98

-2.55

-1.72

P40036

SLPTTPGIR

9.19

-2.79

-1.96

ELPPLSPKS

10.35

-1.82

-0.99

LPPLSPKST

11.14

-5.13

-4.30

Q03016

IPLLTPINS

7.43

-6.65

-5.82

KHPPISSPS

8.67

-2.94

-2.11

NIPLLTPIN

10.05

-5.82

-4.99

Q07807

PFAYPNPMM

6.89

-6.49

-5.66

MFMPPPPLS

9.66

-6.17

-5.34

PTPNPIPVK

9.77

-3.88

-3.05

P40187

PLNLPNNSA

10.37

-5.02

-4.19

NPSPPIYKK

10.81

-4.04

-3.21

P39960

NPATPNQKM

7.75

-4.91

-4.08

DPTLPASNS

10.96

-5.45

-4.62

P26570

TPSKPNLEV

8.29

-3.42

-2.59

MEPKSPILK

8.83

-5.61

-4.78

EPKSPILKT

9.28

-3.72

-2.89

 


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