ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1GCQ-11.PDB
Scoring matrix: BUD14_1GCQ-11_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 16.41
Foldx random average score for Saccharomyces cerevisiae: 13.005

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3221199
Proteins after random average filtering: 7178
 Total fragments: 1332666
Proteins after disorder filtering: 4651
 Total fragments: 82899
Proteins after pattern filtering: 2257
 Total fragments: 12245
Proteins after MINT filtering: 12
 Total fragments: 116


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

16.41

1.59

0.00

Best peptides

FRWRPRN

0.00

-1.82

-3.41

         
Interactors      
P13186

IPMSPNY

8.53

-4.64

-6.23

SIPMSPN

9.01

-2.72

-4.31

IPLTPLA

9.67

-3.67

-5.26

Q12276

LPSRKPK

8.09

-3.16

-4.75

SPQRPLS

9.30

-2.74

-4.33

PQQLPSR

10.50

-3.95

-5.54

P38853

PFDTPTI

10.99

-3.45

-5.04

PTDTPTP

12.02

-2.71

-4.30

TPVTPTS

12.10

-3.06

-4.65

P40095

IPVLPPP

7.07

-7.37

-8.96

PPPRSPN

7.51

-1.87

-3.46

SPNRPTL

7.78

-3.32

-4.91

P53858

PRVKPDS

8.97

-3.89

-5.48

LPEFEPN

8.97

-2.59

-4.18

EPNRPVS

9.18

-3.99

-5.58

P42073

RPPREPI

9.15

-1.70

-3.29

KRPPREP

9.73

-2.41

-4.00

PPREPIE

10.49

-3.47

-5.06

P40036

LPTTPGI

10.37

-4.92

-6.51

LPPLSPK

11.48

-3.24

-4.83

PPLSPKS

12.43

-3.04

-4.63

Q03016

KPSRPST

7.33

-3.11

-4.70

KPQTPIL

8.63

-4.08

-5.67

PLLTPIN

8.80

-3.57

-5.16

Q07807

PVFRPSN

5.86

-2.78

-4.37

IPVKMPK

7.36

-4.53

-6.12

FPFAYPN

7.96

-1.60

-3.19

P40187

PLNLPNN

8.26

-4.30

-5.89

EPLNLPN

9.61

-2.82

-4.41

NPSPPIY

9.83

-4.00

-5.59

P39960

NPATPNQ

9.41

-3.18

-4.77

DPTLPAS

10.76

-3.55

-5.14

FDPTLPA

11.89

-3.79

-5.38

P26570

TPSKPNL

9.40

-3.63

-5.22

STPSKPN

9.96

-0.27

-1.86

DPSTPSK

10.18

-3.39

-4.98

 


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