ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKB-9.PDB
Scoring matrix: BUD14_1CKB-9_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 18.42
Foldx random average score for Saccharomyces cerevisiae: 14.034

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3214021
Proteins after random average filtering: 7178
 Total fragments: 1398151
Proteins after disorder filtering: 4550
 Total fragments: 68340
Proteins after pattern filtering: 2197
 Total fragments: 11958
Proteins after MINT filtering: 12
 Total fragments: 127


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

18.42

-1.35

0.00

Best peptides

RRFWPPHR

0.00

-6.08

-4.73

         
Interactors      
P13186

RPPIPAAL

9.39

-5.76

-4.41

IPLTPLAT

10.78

-6.31

-4.96

NIPLTPLA

11.51

-4.35

-3.00

Q12276

RRPSTTPS

9.41

-3.49

-2.14

PQQLPSRK

10.55

-5.47

-4.12

RPSTTPSH

10.91

-3.64

-2.29

P38853

PFDTPTIQ

11.90

-5.86

-4.51

KPFDTPTI

12.41

-3.16

-1.81

DLATPVTP

12.64

-3.88

-2.53

P40095

IPVLPPPR

8.04

-9.07

-7.72

NNRIPVLP

9.08

-7.38

-6.03

SPNRPTLS

9.48

-5.64

-4.29

P53858

PRVKPDSQ

8.45

-6.00

-4.65

LPEFEPNR

9.73

-4.41

-3.06

KPSPPSSK

11.51

-4.47

-3.12

P42073

RPPREPIE

10.60

-3.97

-2.62

PPREPIEF

11.27

-5.73

-4.38

NKRPPREP

11.49

-6.77

-5.42

P40036

LPTTPGIR

8.32

-7.68

-6.33

LPPLSPKS

10.52

-4.52

-3.17

SKSLPTTP

11.81

-6.42

-5.07

Q03016

IPLLTPIN

9.33

-6.08

-4.73

KPQTPILP

9.66

-7.34

-5.99

KPSRPSTS

9.67

-5.02

-3.67

Q07807

FMPPPPLS

8.19

-4.88

-3.53

MMFMPPPP

8.60

-8.16

-6.81

PVFRPSNN

10.02

-4.53

-3.18

P40187

PLNLPNNS

11.20

-5.54

-4.19

EPLNLPNN

11.48

-5.21

-3.86

NPSPPIYK

11.57

-5.69

-4.34

P39960

NPATPNQK

8.86

-6.72

-5.37

KFFDPTLP

9.36

-6.88

-5.53

DPTLPASN

10.53

-6.83

-5.48

P26570

EPKSPILK

10.11

-6.74

-5.39

TPSKPNLE

10.75

-4.38

-3.03

PLNSPGLS

10.97

-5.23

-3.88

 


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