ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKB-27.PDB
Scoring matrix: BUD14_1CKB-27_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 22.17
Foldx random average score for Saccharomyces cerevisiae: 20.018

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1874723
Proteins after disorder filtering: 4739
 Total fragments: 151363
Proteins after pattern filtering: 2304
 Total fragments: 20072
Proteins after MINT filtering: 13
 Total fragments: 177


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AGAAAAAAA

22.17

3.98

0.00

Best peptides

YRWGMRIRR

0.00

-2.13

-6.12

         
Interactors      
P13186

KAPSYVPNR

10.86

1.04

-2.94

RNSSIPMSP

12.18

-0.43

-4.42

IPMSPNYGN

15.83

0.58

-3.40

Q12276

LPSRKPKRG

11.80

-3.56

-7.54

FGRRPSTTP

12.11

-1.25

-5.23

RRPSTTPSH

12.57

0.85

-3.13

P38853

KPFDTPTIQ

14.85

1.97

-2.01

MDVPTDTPT

15.32

-1.41

-5.39

SAPSPAPKD

16.39

0.55

-3.43

P41818

PKTPYQGAV

19.84

0.07

-3.92

P40095

RSPNRPTLS

12.40

0.88

-3.11

PPRSPNRPT

15.14

-3.70

-7.69

ISSSPTPAP

15.16

1.88

-2.11

P53858

EPNRPVSMS

13.53

0.44

-3.54

EDPKPSPPS

13.67

2.59

-1.40

YLPEFEPNR

13.67

1.25

-2.73

P42073

RPPREPIEF

10.78

-0.82

-4.80

LNKRPPREP

11.35

-1.45

-5.43

KRPPREPIE

13.43

-0.77

-4.75

P40036

IELPPLSPK

14.72

-1.99

-5.97

PPLSPKSTV

16.76

-0.29

-4.27

KSLPTTPGI

17.00

0.42

-3.56

Q03016

KPSRPSTSP

10.35

0.34

-3.65

QQLPSRTPK

14.00

-1.17

-5.15

QLPSRTPKK

14.08

0.02

-3.96

Q07807

YPTPNPIPV

13.43

-4.09

-8.07

FPFAYPNPM

14.34

-1.73

-5.71

PNNSPFPFA

14.60

1.19

-2.79

P40187

GNPSPPIYK

10.34

-1.73

-5.71

ENGNPSPPI

11.95

0.94

-3.04

EENGNPSPP

13.59

-0.60

-4.59

P39960

LINNPATPN

13.38

-0.58

-4.56

KFFDPTLPA

14.08

0.74

-3.25

MLINNPATP

17.75

0.05

-3.94

P26570

NVPDPSTPS

14.18

1.61

-2.38

EPKSPILKT

14.83

-0.22

-4.21

YSTPLNSPG

15.24

-2.82

-6.80

 


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