ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKB-19.PDB
Scoring matrix: BUD14_1CKB-19_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.04
Foldx random average score for Saccharomyces cerevisiae: 15.302

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1572890
Proteins after disorder filtering: 4653
 Total fragments: 99183
Proteins after pattern filtering: 2222
 Total fragments: 11502
Proteins after MINT filtering: 13
 Total fragments: 109


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

17.04

-2.29

0.00

Best peptides

IMSFRGYSY

0.00

-1.37

0.92

         
Interactors      
P13186

IPLTPLATN

8.94

-6.95

-4.66

PMSPNYGNQ

10.05

-6.91

-4.62

SSIPMSPNY

10.89

-6.26

-3.97

Q12276

DPPQQLPSR

10.68

-5.25

-2.96

KISTPTSTP

10.74

-4.50

-2.21

ISTPTSTPT

13.14

-2.80

-0.51

P38853

PYVPSESSQ

10.76

-2.96

-0.67

VMDVPTDTP

11.47

-6.59

-4.30

PFDTPTIQK

11.66

-4.06

-1.77

P41818

PKTPYQGAV

12.43

-5.40

-3.11

P40095

PRSPNRPTL

8.34

-7.74

-5.45

PDSPSSSSL

9.54

-5.35

-3.06

LPPPRSPNR

9.90

-9.62

-7.33

P53858

KPSPPSSKL

8.79

-8.70

-6.41

PNRPVSMSF

9.78

-7.39

-5.10

YLPEFEPNR

10.85

-6.93

-4.64

P42073

PREPIEFDL

10.09

-4.92

-2.63

NKRPPREPI

12.76

-10.64

-8.35

KRPPREPIE

13.91

-6.88

-4.59

P40036

LPTTPGIRS

10.32

-5.36

-3.07

IELPPLSPK

11.96

-5.62

-3.33

PPLSPKSTV

12.56

-7.49

-5.20

Q03016

KPSRPSTSP

10.27

-5.71

-3.42

DPPQQLPSR

10.68

-5.25

-2.96

LFSPANPKI

10.98

-6.81

-4.52

Q07807

PSSPPNNSP

11.15

-5.19

-2.90

SPFPFAYPN

11.96

-5.89

-3.60

NTPVFRPSN

12.40

-4.00

-1.71

P40187

ENGNPSPPI

11.65

-6.36

-4.07

MDEPLNLPN

12.32

-4.86

-2.57

NPSPPIYKK

12.67

-8.32

-6.03

P39960

NPATPNQKM

11.37

-7.79

-5.50

PTLPASNSS

12.43

-2.79

-0.50

PATPNQKMR

13.02

-4.16

-1.87

P26570

PKSPILKTN

9.72

-4.55

-2.26

AYSTPLNSP

10.22

-4.15

-1.86

VPDPSTPSK

10.56

-6.38

-4.09

 


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