ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKA-14.PDB
Scoring matrix: BUD14_1CKA-14_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 20.21
Foldx random average score for Saccharomyces cerevisiae: 14.448

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206843
Proteins after random average filtering: 7178
 Total fragments: 1623096
Proteins after disorder filtering: 4254
 Total fragments: 54667
Proteins after pattern filtering: 1803
 Total fragments: 6148
Proteins after MINT filtering: 12
 Total fragments: 66


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

20.21

0.28

0.00

Best peptides

MKPIFIKNM

0.00

-3.49

-3.77

         
Interactors      
P13186

IPLTPLATN

10.59

-3.57

-3.84

APSYVPNRV

11.56

-6.26

-6.54

NSSIPMSPN

12.19

-3.30

-3.57

Q12276

PPQQLPSRK

12.00

-4.31

-4.59

GTRPKILPK

13.16

-2.35

-2.63

QLPSRKPKR

13.21

-4.17

-4.45

P38853

KPFDTPTIQ

11.84

-3.79

-4.07

NKPFDTPTI

11.97

-3.08

-3.36

PTDTPTPRN

12.76

-3.72

-4.00

P40095

IPVLPPPRS

10.58

-6.96

-7.24

RIPVLPPPR

13.44

-5.00

-5.28

LPPPRSPNR

13.78

-4.08

-4.36

P53858

YLPEFEPNR

10.90

-2.54

-2.81

KPSPPSSKL

12.00

-5.05

-5.33

MTPDSPVKS

12.36

-3.15

-3.42

P42073

PPREPIEFD

12.16

-5.13

-5.41

RPPREPIEF

13.24

-0.52

-0.80

P40036

LPPLSPKST

12.79

-4.95

-5.23

SLPTTPGIR

13.90

-1.39

-1.67

Q03016

IPLLTPINS

9.53

-3.63

-3.90

HPPISSPSN

10.74

-3.20

-3.48

NIPLLTPIN

10.77

-5.04

-5.32

Q07807

TPVFRPSNN

7.96

-6.37

-6.65

NTPVFRPSN

10.36

-2.07

-2.34

MMFMPPPPL

10.77

-7.25

-7.53

P40187

NPSPPIYKK

10.20

-5.42

-5.70

DEPLNLPNN

10.23

-4.14

-4.42

EPLNLPNNS

12.92

-2.55

-2.82

P39960

NPATPNQKM

11.04

-4.25

-4.53

DPTLPASNS

12.87

-2.76

-3.03

P26570

EPKSPILKT

10.75

-5.29

-5.57

MEPKSPILK

11.59

-3.56

-3.84

PKSPILKTN

12.86

-2.38

-2.65

 


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