ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKA-13.PDB
Scoring matrix: BUD14_1CKA-13_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 18.5
Foldx random average score for Saccharomyces cerevisiae: 15.178

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3214021
Proteins after random average filtering: 7178
 Total fragments: 1463538
Proteins after disorder filtering: 4539
 Total fragments: 68244
Proteins after pattern filtering: 2161
 Total fragments: 11291
Proteins after MINT filtering: 12
 Total fragments: 112


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAA

18.50

1.53

0.00

Best peptides

HRFMRRRW

0.00

-6.31

-7.84

         
Interactors      
P13186

SIPMSPNY

9.22

-6.67

-8.20

IPMSPNYG

10.66

-6.01

-7.54

APSYVPNR

11.08

-6.52

-8.05

Q12276

PQQLPSRK

8.00

-7.09

-8.62

PSRKPKRG

10.07

-4.25

-5.78

TRPKILPK

12.13

-3.44

-4.97

P38853

PFDTPTIQ

13.37

-4.73

-6.26

APSPAPKD

14.71

-4.24

-5.77

P40095

PPRSPNRP

10.26

-6.03

-7.56

PVLPPPRS

10.37

-6.28

-7.81

IPVLPPPR

10.50

-6.75

-8.28

P53858

PEFEPNRP

10.58

-5.27

-6.80

LPEFEPNR

10.64

-6.58

-8.11

MTPDSPVK

11.86

-4.07

-5.60

P42073

PREPIEFD

11.22

-5.10

-6.63

RPPREPIE

12.27

-3.17

-4.70

PPREPIEF

12.40

-3.71

-5.24

P40036

LPPLSPKS

9.91

-7.17

-8.70

LPTTPGIR

11.31

-6.96

-8.49

SKSLPTTP

11.80

-5.79

-7.32

Q03016

PQQLPSRT

9.23

-6.86

-8.39

TNTKPSRP

9.58

-6.74

-8.27

KPQTPILP

11.92

-5.43

-6.96

Q07807

MMFMPPPP

9.87

-7.78

-9.31

FMPPPPLS

11.36

-6.51

-8.04

MFMPPPPL

12.25

-5.70

-7.23

P40187

NPSPPIYK

9.72

-6.14

-7.67

PLNLPNNS

12.50

-6.54

-8.07

GNPSPPIY

12.58

-5.79

-7.32

P39960

KFFDPTLP

10.14

-5.71

-7.24

DPTLPASN

13.06

-4.89

-6.42

NPATPNQK

13.27

-4.95

-6.48

P26570

MEPKSPIL

10.57

-3.93

-5.46

TPSKPNLE

11.57

-5.69

-7.22

EPKSPILK

11.75

-5.35

-6.88

 


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