ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BUD14_1CKA-11.PDB
Scoring matrix: BUD14_1CKA-11_mat
Uniprot code: P27637
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 15.12
Foldx random average score for Saccharomyces cerevisiae: 13.731

Available information for P27637 in MINT (Nov 2008):
Nš of interacting proteins: 27
 Proteins belonging to other specie: 0
Nš of interactions described: 37
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3221199
Proteins after random average filtering: 7178
 Total fragments: 2022540
Proteins after disorder filtering: 4924
 Total fragments: 130808
Proteins after pattern filtering: 2339
 Total fragments: 15683
Proteins after MINT filtering: 12
 Total fragments: 147


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

15.12

-0.54

0.00

Best peptides

RRRRLWQ

0.00

-0.98

-0.44

         
Interactors      
P13186

RPPIPAA

8.92

-5.30

-4.76

APSYVPN

9.25

-4.93

-4.39

SIPMSPN

9.32

-3.74

-3.20

Q12276

TRPKILP

7.38

-5.61

-5.07

RPKILPK

7.67

-4.33

-3.79

PSRKPKR

8.77

-4.39

-3.85

P38853

PFDTPTI

11.07

-4.03

-3.49

NKPFDTP

11.30

-1.52

-0.98

APSPAPK

12.02

-3.38

-2.84

P40095

IPVLPPP

6.71

-7.29

-6.75

SPNRPTL

7.24

-3.54

-3.00

PPPRSPN

8.12

-4.99

-4.45

P53858

PRVKPDS

8.13

-4.96

-4.42

LPEFEPN

8.95

-5.04

-4.50

EPNRPVS

9.24

-5.51

-4.97

P42073

RPPREPI

6.51

-0.77

-0.23

KRPPREP

8.37

-5.26

-4.72

PPREPIE

9.31

-5.03

-4.49

P40036

LPPLSPK

9.93

-5.67

-5.13

LPTTPGI

10.82

-5.86

-5.32

ELPPLSP

11.29

-3.93

-3.39

Q03016

KPSRPST

6.64

-4.44

-3.90

KPQTPIL

8.54

-4.88

-4.34

NIPLLTP

8.67

-5.59

-5.05

Q07807

PVFRPSN

6.35

-4.78

-4.24

TPVFRPS

8.93

-6.22

-5.68

MFMPPPP

9.06

-5.68

-5.14

P40187

PLNLPNN

9.06

-6.54

-6.00

EPLNLPN

9.30

-3.71

-3.17

GNPSPPI

10.82

-3.79

-3.25

P39960

NPATPNQ

9.25

-4.12

-3.58

DPTLPAS

9.88

-5.47

-4.93

FDPTLPA

12.39

-3.26

-2.72

P26570

TPSKPNL

7.67

-4.29

-3.75

EPKSPIL

10.09

-3.51

-2.97

MEPKSPI

10.26

-3.48

-2.94

 


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