|
Matrix information:
(Help)
ADAN-name: BEM1-D2_1SEM-7.PDB
Scoring matrix: BEM1-D2_1SEM-7_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 14.68
Foldx random average score for Saccharomyces cerevisiae: 11.933 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1462240
Proteins after disorder filtering: 4483
Total fragments: 62130
Proteins after pattern filtering: 1960
Total fragments: 8786
Proteins after MINT filtering: 9
Total fragments: 68
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAA |
14.68
|
0.55 |
0.00 |
| Best peptides |
WRHFFPWE |
0.00
|
-4.49 |
-5.04 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
QPPQSPSF |
9.82
|
-2.86 |
-3.41 |
|
PKPPSYPS |
10.55
|
-3.14 |
-3.69 |
|
PSPVQPPQ |
10.65
|
-3.43 |
-3.98 |
| P21268 |
SKPISPPP |
10.29
|
-3.98 |
-4.53 |
| P11433 |
PSATPNME |
10.01
|
-6.00 |
-6.55 |
| P50090 |
TALPWSPE |
10.67
|
-1.85 |
-2.40 |
|
VTPTLPPN |
10.87
|
-3.97 |
-4.52 |
|
ALPWSPES |
11.46
|
-2.16 |
-2.71 |
| P32618 |
VPNLSPRL |
8.29
|
-5.93 |
-6.48 |
|
NPVISPYS |
8.90
|
-5.01 |
-5.56 |
|
TNPMHPQS |
9.82
|
-3.20 |
-3.75 |
| Q03497 |
FPSKNPLK |
8.81
|
-4.61 |
-5.16 |
|
KVKPSKPE |
9.26
|
-3.79 |
-4.34 |
|
KPKVKPSK |
9.72
|
-4.26 |
-4.81 |
| P39969 |
QPPKSPLL |
7.64
|
-5.39 |
-5.94 |
|
VSPRRAPK |
8.95
|
-3.75 |
-4.30 |
|
RRAPKPPS |
9.30
|
-3.41 |
-3.96 |
| P22224 |
STPTFPNA |
11.60
|
-2.72 |
-3.27 |
|
TPTFPNAN |
11.63
|
-4.22 |
-4.77 |
| P35735 |
SPHFNPQS |
10.06
|
-3.34 |
-3.89 |
|
ASPHFNPQ |
10.53
|
-2.80 |
-3.35 |
|
