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Matrix information:
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ADAN-name: BEM1-D2_1SEM-29.PDB
Scoring matrix: BEM1-D2_1SEM-29_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 22.75
Foldx random average score for Saccharomyces cerevisiae: 15.981 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3199821
Proteins after random average filtering: 7178
Total fragments: 1331422
Proteins after disorder filtering: 4015
Total fragments: 44102
Proteins after pattern filtering: 1948
Total fragments: 9886
Proteins after MINT filtering: 9
Total fragments: 65
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
22.75
|
-2.63 |
0.00 |
| Best peptides |
RYPPKFPRWH |
0.00
|
-12.94 |
-10.31 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPSYP |
10.88
|
-6.04 |
-3.41 |
|
CFKLVPPQPG |
11.99
|
-9.12 |
-6.49 |
|
PKPPSYPSPV |
13.91
|
-7.87 |
-5.24 |
| P21268 |
LNLSKPISPP |
13.45
|
-7.43 |
-4.80 |
|
LSKPISPPPS |
14.42
|
-8.31 |
-5.68 |
|
SKPISPPPSL |
15.42
|
-8.11 |
-5.48 |
| P11433 |
SNPSATPNME |
14.76
|
-7.25 |
-4.62 |
| P50090 |
VTPTLPPNQH |
10.34
|
-10.68 |
-8.05 |
|
ALPWSPESKN |
15.34
|
-6.23 |
-3.60 |
| P32618 |
EPSPKPSHKR |
11.69
|
-8.33 |
-5.70 |
|
KVPAKEPSPK |
11.71
|
-6.82 |
-4.19 |
|
EPAPLPSHYS |
12.29
|
-8.31 |
-5.68 |
| Q03497 |
NGKFIPSRPA |
8.80
|
-12.47 |
-9.84 |
|
KPKVKPSKPE |
10.06
|
-8.29 |
-5.66 |
|
SFPSKNPLKN |
10.23
|
-8.36 |
-5.73 |
| P39969 |
AQPPKSPLLN |
8.40
|
-9.51 |
-6.88 |
|
RRAPKPPSYP |
10.38
|
-8.02 |
-5.39 |
|
CFKLLPPQPG |
10.76
|
-10.49 |
-7.86 |
| P22224 |
MTPSTPTFPN |
13.80
|
-11.03 |
-8.40 |
|
IFPSTPGTID |
15.40
|
-9.04 |
-6.41 |
|
STPTFPNANG |
15.82
|
-8.28 |
-5.65 |
| P35735 |
PLASPHFNPQ |
15.12
|
-6.06 |
-3.43 |
|
ASPHFNPQSS |
15.47
|
-6.23 |
-3.60 |
|
