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Matrix information:
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ADAN-name: BEM1-D2_1SEM-28.PDB
Scoring matrix: BEM1-D2_1SEM-28_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 23.08
Foldx random average score for Saccharomyces cerevisiae: 18.476 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3199821
Proteins after random average filtering: 7178
Total fragments: 1459236
Proteins after disorder filtering: 4114
Total fragments: 48471
Proteins after pattern filtering: 1905
Total fragments: 8283
Proteins after MINT filtering: 9
Total fragments: 68
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
23.08
|
-3.83 |
0.00 |
| Best peptides |
RRRIFPRPRR |
0.00
|
-8.63 |
-4.80 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PPQSPSFNNR |
11.64
|
-8.89 |
-5.06 |
|
KPPSYPSPVQ |
15.03
|
-6.65 |
-2.82 |
|
KLVPPQPGSK |
15.33
|
-9.20 |
-5.37 |
| P21268 |
PISPPPSLKK |
13.89
|
-8.90 |
-5.07 |
|
KPISPPPSLK |
14.47
|
-9.75 |
-5.92 |
|
SKPISPPPSL |
18.23
|
-6.52 |
-2.69 |
| P11433 |
NSNPSATPNM |
16.26
|
-5.91 |
-2.08 |
| P50090 |
TPTLPPNQHR |
10.60
|
-9.45 |
-5.62 |
|
TALPWSPESK |
16.66
|
-5.22 |
-1.39 |
|
VTPTLPPNQH |
17.30
|
-7.58 |
-3.75 |
| P32618 |
EPSPKPSHKR |
12.14
|
-10.75 |
-6.92 |
|
TPSTSPSGRR |
12.38
|
-10.08 |
-6.25 |
|
VPNLSPRLSN |
14.05
|
-7.57 |
-3.74 |
| Q03497 |
LPPIPPTKSK |
10.47
|
-10.22 |
-6.39 |
|
QTHAPTTPNR |
11.60
|
-8.37 |
-4.54 |
|
KPSKPEAKSK |
13.54
|
-9.30 |
-5.47 |
| P39969 |
ALSPIPSPTR |
12.16
|
-8.91 |
-5.08 |
|
PKSPLLNNTR |
13.75
|
-8.75 |
-4.92 |
|
SPEENPITSM |
14.74
|
-7.24 |
-3.41 |
| P22224 |
TPSTPTFPNA |
15.24
|
-8.78 |
-4.95 |
|
STPTFPNANG |
15.81
|
-8.65 |
-4.82 |
|
FPSTPGTIDS |
17.19
|
-7.58 |
-3.75 |
| P35735 |
PHFNPQSSEK |
16.93
|
-8.38 |
-4.55 |
|
SPHFNPQSSE |
17.82
|
-6.16 |
-2.33 |
|
LASPHFNPQS |
18.08
|
-7.38 |
-3.55 |
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