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Matrix information:
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ADAN-name: BEM1-D2_1SEM-27.PDB
Scoring matrix: BEM1-D2_1SEM-27_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 12.72
Foldx random average score for Saccharomyces cerevisiae: 16.246 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7177
Total fragments: 1712922
Proteins after disorder filtering: 4733
Total fragments: 158332
Proteins after pattern filtering: 2303
Total fragments: 19617
Proteins after MINT filtering: 9
Total fragments: 131
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
12.72
|
-1.74 |
0.00 |
| Best peptides |
WHRHLRMWR |
0.00
|
-4.18 |
-2.44 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
SPGRAPKPP |
7.91
|
-4.05 |
-2.31 |
|
PGRAPKPPS |
9.00
|
-5.76 |
-4.02 |
|
KPPSYPSPV |
9.87
|
-3.32 |
-1.58 |
| P21268 |
LNLSKPISP |
10.76
|
-2.98 |
-1.24 |
|
KPISPPPSL |
12.18
|
-2.00 |
-0.26 |
|
LSKPISPPP |
12.19
|
-3.65 |
-1.91 |
| P11433 |
NPSATPNME |
11.66
|
-4.66 |
-2.92 |
|
SNPSATPNM |
12.23
|
0.35 |
2.09 |
|
NSNPSATPN |
12.90
|
0.04 |
1.78 |
| P50090 |
LPWSPESKN |
10.95
|
-4.27 |
-2.53 |
|
ASTALPWSP |
12.30
|
-2.06 |
-0.32 |
|
IVTPTLPPN |
13.70
|
-2.33 |
-0.59 |
| P32618 |
YSPSNEPIQ |
9.77
|
-2.31 |
-0.57 |
|
YKANPVISP |
10.14
|
-3.60 |
-1.86 |
|
SPSNEPIQP |
11.19
|
-1.16 |
0.58 |
| Q03497 |
FIPSRPAPK |
9.21
|
-4.10 |
-2.36 |
|
IPSRPAPKP |
9.41
|
-4.72 |
-2.98 |
|
SRPAPKPPS |
9.65
|
-4.40 |
-2.66 |
| P39969 |
SPRRAPKPP |
6.20
|
-5.27 |
-3.53 |
|
VSPRRAPKP |
8.54
|
-1.30 |
0.44 |
|
PRRAPKPPS |
8.58
|
-5.52 |
-3.78 |
| P22224 |
MTPSTPTFP |
9.44
|
-2.45 |
-0.71 |
|
GYQSPMTPS |
11.66
|
-3.80 |
-2.06 |
|
IFPSTPGTI |
12.94
|
-0.43 |
1.31 |
| P35735 |
ASPHFNPQS |
9.90
|
-1.94 |
-0.20 |
|
PHFNPQSSE |
12.31
|
-1.92 |
-0.18 |
|
SPHFNPQSS |
12.60
|
-1.72 |
0.02 |
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