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Matrix information:
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ADAN-name: BEM1-D2_1SEM-23.PDB
Scoring matrix: BEM1-D2_1SEM-23_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 14.55
Foldx random average score for Saccharomyces cerevisiae: 11.168 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3221355
Proteins after random average filtering: 7178
Total fragments: 1455267
Proteins after disorder filtering: 4592
Total fragments: 58045
Proteins after pattern filtering: 1873
Total fragments: 6137
Proteins after MINT filtering: 8
Total fragments: 45
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
14.55
|
-2.32 |
0.00 |
| Best peptides |
RPLRPWM |
0.00
|
-6.62 |
-4.30 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPS |
7.69
|
-5.00 |
-2.68 |
|
SPGRAPK |
8.19
|
-4.71 |
-2.39 |
|
SPVQPPQ |
9.84
|
-3.76 |
-1.44 |
| P21268 |
KPISPPP |
9.72
|
-4.94 |
-2.62 |
| P50090 |
TPTLPPN |
9.82
|
-5.30 |
-2.98 |
| P32618 |
PNLSPRL |
8.80
|
-5.44 |
-3.12 |
|
EPIQPSS |
9.18
|
-3.65 |
-1.33 |
|
NPMHPQS |
9.41
|
-4.60 |
-2.28 |
| Q03497 |
IPSRPAP |
6.95
|
-5.63 |
-3.31 |
|
FPSKNPL |
7.45
|
-4.86 |
-2.54 |
|
HKPKVKP |
7.57
|
-5.43 |
-3.11 |
| P39969 |
SPRRAPK |
5.97
|
-4.92 |
-2.60 |
|
VSPRRAP |
7.31
|
-5.12 |
-2.80 |
|
RAPKPPS |
7.69
|
-5.00 |
-2.68 |
| P22224 |
TPTFPNA |
9.57
|
-3.79 |
-1.47 |
|
QSPMTPS |
10.27
|
-5.26 |
-2.94 |
| P35735 |
SPHFNPQ |
9.01
|
-3.39 |
-1.07 |
|
ASPHFNP |
10.90
|
-4.23 |
-1.91 |
|
