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Matrix information:
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ADAN-name: BEM1-D2_1SEM-21.PDB
Scoring matrix: BEM1-D2_1SEM-21_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 19.53
Foldx random average score for Saccharomyces cerevisiae: 18.661 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3199821
Proteins after random average filtering: 7178
Total fragments: 1838089
Proteins after disorder filtering: 4323
Total fragments: 61093
Proteins after pattern filtering: 1488
Total fragments: 3268
Proteins after MINT filtering: 7
Total fragments: 20
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAGGAAAA |
19.53
|
-2.01 |
0.00 |
| Best peptides |
EEKMHRPMMR |
0.00
|
-5.14 |
-3.13 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
QSNPTSPTKQ |
15.01
|
-3.69 |
-1.68 |
|
PTSPTKQTFT |
15.07
|
-4.70 |
-2.69 |
|
PQSPSFNNRY |
16.00
|
-5.69 |
-3.68 |
| P11433 |
SNPSATPNME |
18.30
|
-4.34 |
-2.33 |
| P50090 |
TALPWSPESK |
18.22
|
-1.47 |
0.54 |
|
ALPWSPESKN |
18.31
|
-5.02 |
-3.01 |
| P32618 |
EPSPKPSHKR |
11.66
|
-6.69 |
-4.68 |
|
TPSTSPSGRR |
15.94
|
-4.34 |
-2.33 |
|
PIVPGNNTTL |
16.07
|
-4.75 |
-2.74 |
| Q03497 |
KVKPSKPEAK |
14.96
|
-3.62 |
-1.61 |
|
THAPTTPNRT |
15.56
|
-3.55 |
-1.54 |
|
TGLPGSPQVS |
16.11
|
-2.85 |
-0.84 |
| P39969 |
PKSPLLNNTR |
13.94
|
-5.25 |
-3.24 |
|
LLPPQPGSKK |
17.75
|
-5.02 |
-3.01 |
|
SPIPSPTRNS |
18.08
|
-3.18 |
-1.17 |
| P22224 |
PSTPTFPNAN |
18.41
|
-3.46 |
-1.45 |
|
