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Matrix information:
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ADAN-name: BEM1-D2_1SEM-17.PDB
Scoring matrix: BEM1-D2_1SEM-17_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 11.82
Foldx random average score for Saccharomyces cerevisiae: 14.475 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1629165
Proteins after disorder filtering: 4644
Total fragments: 90828
Proteins after pattern filtering: 2055
Total fragments: 8339
Proteins after MINT filtering: 9
Total fragments: 61
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
11.82
|
-0.35 |
0.00 |
| Best peptides |
YPFRNGLSF |
0.00
|
-6.90 |
-6.55 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
IFESPGRAP |
10.42
|
-3.23 |
-2.88 |
|
VPPQPGSKK |
10.66
|
-4.57 |
-4.22 |
|
VQPPQSPSF |
10.91
|
-3.01 |
-2.66 |
| P21268 |
NLSKPISPP |
14.29
|
-3.17 |
-2.82 |
| P11433 |
SNPSATPNM |
13.79
|
-3.24 |
-2.89 |
| P50090 |
LPWSPESKN |
12.56
|
-5.00 |
-4.65 |
|
RIVTPTLPP |
12.77
|
-5.67 |
-5.32 |
| P32618 |
KVPAKEPSP |
11.17
|
-3.10 |
-2.75 |
|
KEPSPKPSH |
11.19
|
-2.44 |
-2.09 |
|
VPIVPGNNT |
11.47
|
-4.33 |
-3.98 |
| Q03497 |
HKPKVKPSK |
10.58
|
-0.81 |
-0.46 |
|
KPSKPEAKS |
10.66
|
-5.36 |
-5.01 |
|
IPSRPAPKP |
10.72
|
-7.67 |
-7.32 |
| P39969 |
LPPQPGSKK |
9.68
|
-5.04 |
-4.69 |
|
VSPRRAPKP |
11.38
|
-5.69 |
-5.34 |
|
YPSPAQPPK |
11.55
|
-6.29 |
-5.94 |
| P22224 |
YQSPMTPST |
9.92
|
0.12 |
0.47 |
|
FPSTPGTID |
12.13
|
-2.48 |
-2.13 |
|
PMTPSTPTF |
13.34
|
-1.29 |
-0.94 |
| P35735 |
LASPHFNPQ |
14.10
|
-0.52 |
-0.17 |
|
PHFNPQSSE |
14.21
|
-2.49 |
-2.14 |
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