Matrix information:
(Help) ADAN-name: BEM1-D2_1SEM-12.PDB Scoring matrix: BEM1-D2_1SEM-12_mat Uniprot code: P29366 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAA Foldx wt ligand score: 12.27 Foldx random average score for Saccharomyces cerevisiae: 10.146 Available information for P29366 in MINT (Nov 2008): Nš of interacting proteins: 16 Proteins belonging to other specie: 1 Nš of interactions described: 42 Interactions with other species: 2
Genome scanning information:
Subcellular location: True Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7178 Total fragments: 3214177 Proteins after random average filtering: 7178 Total fragments: 1332690 Proteins after disorder filtering: 4593 Total fragments: 77275 Proteins after pattern filtering: 2221 Total fragments: 12845 Proteins after MINT filtering: 9 Total fragments: 94
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
AAAAAAAA |
12.27
|
-1.09 |
0.00 |
Best peptides |
RYFMPRDR |
0.00
|
-4.71 |
-3.62 |
|
|
|
|
|
Interactors |
|
|
|
|
P38041 |
PSYPSPVQ |
7.97
|
-3.74 |
-2.65 |
|
FESPGRAP |
8.32
|
-2.23 |
-1.14 |
|
PKPPSYPS |
8.50
|
-3.62 |
-2.53 |
P21268 |
SKPISPPP |
8.49
|
-4.07 |
-2.98 |
|
LSKPISPP |
8.72
|
-2.63 |
-1.54 |
|
NLSKPISP |
9.98
|
-2.62 |
-1.53 |
P11433 |
SNPSATPN |
9.71
|
-2.52 |
-1.43 |
P50090 |
ALPWSPES |
7.59
|
-3.65 |
-2.56 |
|
VTPTLPPN |
8.76
|
-3.61 |
-2.52 |
|
IVTPTLPP |
8.97
|
-3.16 |
-2.07 |
P32618 |
PNLSPRLS |
7.26
|
-5.29 |
-4.20 |
|
SEPAPLPS |
7.41
|
-4.13 |
-3.04 |
|
TNPMHPQS |
8.04
|
-4.84 |
-3.75 |
Q03497 |
PSKNPLKN |
6.90
|
-4.31 |
-3.22 |
|
KFIPSRPA |
7.59
|
-5.72 |
-4.63 |
|
KSFPSKNP |
8.03
|
-3.64 |
-2.55 |
P39969 |
PSYPSPAQ |
8.08
|
-3.96 |
-2.87 |
|
FKLLPPQP |
8.18
|
-5.59 |
-4.50 |
|
PKPPSYPS |
8.50
|
-3.62 |
-2.53 |
P22224 |
GYQSPMTP |
8.60
|
-3.73 |
-2.64 |
|
QSPMTPST |
8.89
|
-3.85 |
-2.76 |
|
PTFPNANG |
9.23
|
-3.06 |
-1.97 |
P35735 |
PHFNPQSS |
7.64
|
-3.23 |
-2.14 |
|
SPHFNPQS |
9.42
|
-4.44 |
-3.35 |
|
LASPHFNP |
9.65
|
-1.70 |
-0.61 |
|