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Matrix information:
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ADAN-name: BEM1-D2_1SEM-1.PDB
Scoring matrix: BEM1-D2_1SEM-1_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 25.68
Foldx random average score for Saccharomyces cerevisiae: 22.826 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3199821
Proteins after random average filtering: 7178
Total fragments: 1821627
Proteins after disorder filtering: 4442
Total fragments: 83979
Proteins after pattern filtering: 2246
Total fragments: 17655
Proteins after MINT filtering: 9
Total fragments: 123
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
25.68
|
-2.19 |
0.00 |
| Best peptides |
WLWRYLRRRY |
0.00
|
-8.89 |
-6.70 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
SPGRAPKPPS |
17.05
|
-9.05 |
-6.86 |
|
PKPPSYPSPV |
17.12
|
-7.89 |
-5.70 |
|
FKLVPPQPGS |
17.56
|
-5.04 |
-2.85 |
| P21268 |
SKPISPPPSL |
16.39
|
-6.46 |
-4.27 |
|
PLNLSKPISP |
16.43
|
-8.33 |
-6.14 |
|
KPISPPPSLK |
19.65
|
-7.57 |
-5.38 |
| P11433 |
NSNPSATPNM |
22.29
|
-5.26 |
-3.07 |
| P50090 |
ALPWSPESKN |
17.65
|
-6.54 |
-4.35 |
|
IVTPTLPPNQ |
17.65
|
-8.50 |
-6.31 |
|
VTPTLPPNQH |
19.44
|
-6.47 |
-4.28 |
| P32618 |
AKEPSPKPSH |
16.36
|
-4.86 |
-2.67 |
|
YKANPVISPY |
16.46
|
-8.20 |
-6.01 |
|
VGPKVPAKEP |
17.16
|
-5.92 |
-3.73 |
| Q03497 |
HKPKVKPSKP |
11.63
|
-8.16 |
-5.97 |
|
GKFIPSRPAP |
14.27
|
-7.91 |
-5.72 |
|
PKVKPSKPEA |
14.65
|
-6.39 |
-4.20 |
| P39969 |
YCFKLLPPQP |
12.50
|
-8.83 |
-6.64 |
|
VSPRRAPKPP |
14.59
|
-11.02 |
-8.83 |
|
QPPKSPLLNN |
16.12
|
-7.54 |
-5.35 |
| P22224 |
QSPMTPSTPT |
20.37
|
-7.17 |
-4.98 |
|
NGYQSPMTPS |
20.94
|
-5.76 |
-3.57 |
|
PSTPTFPNAN |
22.00
|
-6.30 |
-4.11 |
| P35735 |
PLASPHFNPQ |
17.74
|
-6.40 |
-4.21 |
|
LASPHFNPQS |
20.54
|
-6.14 |
-3.95 |
|
PHFNPQSSEK |
21.88
|
-5.99 |
-3.80 |
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