|
Matrix information:
(Help)
ADAN-name: BEM1-D2_1GCQ-29.PDB
Scoring matrix: BEM1-D2_1GCQ-29_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.03
Foldx random average score for Saccharomyces cerevisiae: 12.366 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3199821
Proteins after random average filtering: 7178
Total fragments: 1299274
Proteins after disorder filtering: 3901
Total fragments: 43694
Proteins after pattern filtering: 2005
Total fragments: 11181
Proteins after MINT filtering: 8
Total fragments: 75
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
18.03
|
-1.47 |
0.00 |
| Best peptides |
RYPPRMPFRH |
0.00
|
-14.03 |
-12.56 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPSYPS |
8.78
|
-10.35 |
-8.88 |
|
CFKLVPPQPG |
9.05
|
-9.37 |
-7.90 |
|
KPPSYPSPVQ |
9.49
|
-8.85 |
-7.38 |
| P21268 |
SKPISPPPSL |
10.73
|
-8.48 |
-7.01 |
|
PISPPPSLKK |
11.19
|
-8.33 |
-6.86 |
|
LNLSKPISPP |
11.50
|
-7.04 |
-5.57 |
| P50090 |
VTPTLPPNQH |
7.51
|
-10.32 |
-8.85 |
|
ALPWSPESKN |
10.73
|
-8.06 |
-6.59 |
|
PTLPPNQHRG |
10.85
|
-8.90 |
-7.43 |
| P32618 |
EPSPKPSHKR |
8.26
|
-9.39 |
-7.92 |
|
EPAPLPSHYS |
9.05
|
-9.12 |
-7.65 |
|
DVPIVPGNNT |
9.87
|
-7.56 |
-6.09 |
| Q03497 |
SFPSKNPLKN |
6.60
|
-9.34 |
-7.87 |
|
FIPSRPAPKP |
7.61
|
-9.47 |
-8.00 |
|
VKPSKPEAKS |
8.11
|
-9.59 |
-8.12 |
| P39969 |
AQPPKSPLLN |
7.18
|
-10.06 |
-8.59 |
|
CFKLLPPQPG |
7.23
|
-10.71 |
-9.24 |
|
RAPKPPSYPS |
8.78
|
-10.35 |
-8.88 |
| P22224 |
MTPSTPTFPN |
6.75
|
-10.80 |
-9.33 |
|
IFPSTPGTID |
10.20
|
-8.51 |
-7.04 |
|
STPTFPNANG |
10.84
|
-8.24 |
-6.77 |
| P35735 |
ASPHFNPQSS |
10.20
|
-5.73 |
-4.26 |
|
PLASPHFNPQ |
11.72
|
-6.90 |
-5.43 |
|
