Matrix information:
(Help) ADAN-name: BEM1-D2_1GCQ-26.PDB Scoring matrix: BEM1-D2_1GCQ-26_mat Uniprot code: P29366 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAAA Foldx wt ligand score: 17.62 Foldx random average score for Saccharomyces cerevisiae: 14.037 Available information for P29366 in MINT (Nov 2008): Nš of interacting proteins: 16 Proteins belonging to other specie: 1 Nš of interactions described: 42 Interactions with other species: 2
Genome scanning information:
Subcellular location: True Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7178 Total fragments: 3206999 Proteins after random average filtering: 7178 Total fragments: 1299321 Proteins after disorder filtering: 4276 Total fragments: 65026 Proteins after pattern filtering: 2207 Total fragments: 15512 Proteins after MINT filtering: 9 Total fragments: 108
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
AAAAAAAAA |
17.62
|
-2.06 |
0.00 |
Best peptides |
DDRPRRFRR |
0.00
|
-3.31 |
-1.25 |
|
|
|
|
|
Interactors |
|
|
|
|
P38041 |
FESPGRAPK |
8.28
|
-8.09 |
-6.03 |
|
GRAPKPPSY |
8.41
|
-7.91 |
-5.85 |
|
VQPPQSPSF |
9.62
|
-7.26 |
-5.20 |
P21268 |
KPISPPPSL |
10.28
|
-5.51 |
-3.45 |
|
SKPISPPPS |
10.61
|
-5.92 |
-3.86 |
|
LSKPISPPP |
12.16
|
-6.25 |
-4.19 |
P11433 |
SNPSATPNM |
12.22
|
-7.81 |
-5.75 |
P50090 |
PTLPPNQHR |
11.20
|
-7.48 |
-5.42 |
|
VTPTLPPNQ |
11.88
|
-5.92 |
-3.86 |
|
IVTPTLPPN |
12.26
|
-8.97 |
-6.91 |
P32618 |
KEPSPKPSH |
8.38
|
-6.81 |
-4.75 |
|
SEPAPLPSH |
8.87
|
-8.38 |
-6.32 |
|
PSPKPSHKR |
10.04
|
-5.99 |
-3.93 |
Q03497 |
KFIPSRPAP |
6.84
|
-8.03 |
-5.97 |
|
HKPKVKPSK |
8.07
|
-7.04 |
-4.98 |
|
PLPPIPPTK |
8.81
|
-7.12 |
-5.06 |
P39969 |
RRAPKPPSY |
7.68
|
-8.63 |
-6.57 |
|
LSPIPSPTR |
9.07
|
-6.59 |
-4.53 |
|
YPSPAQPPK |
9.97
|
-5.99 |
-3.93 |
P22224 |
TPSTPTFPN |
12.44
|
-5.44 |
-3.38 |
|
STPTFPNAN |
12.54
|
-4.97 |
-2.91 |
|
PMTPSTPTF |
12.74
|
-7.63 |
-5.57 |
P35735 |
LASPHFNPQ |
13.00
|
-3.79 |
-1.73 |
|
PLASPHFNP |
13.74
|
-3.81 |
-1.75 |
|
SPHFNPQSS |
14.00
|
-3.17 |
-1.11 |
|