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Matrix information:
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ADAN-name: BEM1-D2_1GCQ-19.PDB
Scoring matrix: BEM1-D2_1GCQ-19_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.22
Foldx random average score for Saccharomyces cerevisiae: 15.757 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1486635
Proteins after disorder filtering: 4474
Total fragments: 59673
Proteins after pattern filtering: 2028
Total fragments: 8221
Proteins after MINT filtering: 7
Total fragments: 66
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
16.22
|
-1.76 |
0.00 |
| Best peptides |
RKRRMGRCF |
0.00
|
-3.73 |
-1.97 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VPPQPGSKK |
10.64
|
-6.56 |
-4.80 |
|
IFESPGRAP |
12.38
|
-5.85 |
-4.09 |
|
PPQPGSKKG |
12.64
|
-6.19 |
-4.43 |
| P50090 |
RIVTPTLPP |
11.89
|
-6.87 |
-5.11 |
|
PTLPPNQHR |
12.87
|
-7.58 |
-5.82 |
|
IVTPTLPPN |
14.39
|
-5.98 |
-4.22 |
| P32618 |
VPIVPGNNT |
10.87
|
-4.87 |
-3.11 |
|
GPKVPAKEP |
13.23
|
-6.79 |
-5.03 |
|
PSPKPSHKR |
13.94
|
-5.80 |
-4.04 |
| Q03497 |
PPIPPTKSK |
10.50
|
-7.02 |
-5.26 |
|
IPSRPAPKP |
11.57
|
-10.28 |
-8.52 |
|
GKFIPSRPA |
12.13
|
-5.93 |
-4.17 |
| P39969 |
LPPQPGSKK |
10.41
|
-7.04 |
-5.28 |
|
PPQPGSKKG |
12.64
|
-6.19 |
-4.43 |
|
PPKSPLLNN |
13.13
|
-7.08 |
-5.32 |
| P22224 |
YQSPMTPST |
14.02
|
-3.45 |
-1.69 |
|
PTFPNANGV |
14.59
|
-3.61 |
-1.85 |
|
PMTPSTPTF |
14.60
|
-6.56 |
-4.80 |
| P35735 |
PLASPHFNP |
15.10
|
-6.85 |
-5.09 |
|
