|
Matrix information:
(Help)
ADAN-name: BEM1-D2_1GCQ-12.PDB
Scoring matrix: BEM1-D2_1GCQ-12_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.66
Foldx random average score for Saccharomyces cerevisiae: 9.401 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1326549
Proteins after disorder filtering: 4541
Total fragments: 65913
Proteins after pattern filtering: 2090
Total fragments: 10342
Proteins after MINT filtering: 9
Total fragments: 78
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
12.66
|
-1.32 |
0.00 |
| Best peptides |
YWIMPRWR |
0.00
|
-5.24 |
-3.92 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
KLVPPQPG |
6.84
|
-5.52 |
-4.20 |
|
PGRAPKPP |
7.16
|
-4.52 |
-3.20 |
|
PKPPSYPS |
7.66
|
-3.15 |
-1.83 |
| P21268 |
KPISPPPS |
7.72
|
-5.16 |
-3.84 |
|
SKPISPPP |
8.51
|
-2.73 |
-1.41 |
|
LSKPISPP |
9.29
|
-1.73 |
-0.41 |
| P11433 |
SNPSATPN |
9.20
|
-1.92 |
-0.60 |
| P50090 |
RIVTPTLP |
7.96
|
-4.56 |
-3.24 |
|
ALPWSPES |
8.19
|
-2.39 |
-1.07 |
|
STALPWSP |
8.69
|
-3.34 |
-2.02 |
| P32618 |
PVISPYSS |
6.63
|
-5.36 |
-4.04 |
|
PKVPAKEP |
6.71
|
-5.13 |
-3.81 |
|
PIVPGNNT |
7.34
|
-5.38 |
-4.06 |
| Q03497 |
KFIPSRPA |
2.83
|
-8.03 |
-6.71 |
|
KSFPSKNP |
5.87
|
-4.52 |
-3.20 |
|
PSKNPLKN |
6.38
|
-5.10 |
-3.78 |
| P39969 |
PRRAPKPP |
6.77
|
-5.00 |
-3.68 |
|
PKPPSYPS |
7.66
|
-3.15 |
-1.83 |
|
SPIPSPTR |
7.84
|
-5.01 |
-3.69 |
| P22224 |
GYQSPMTP |
7.67
|
-4.03 |
-2.71 |
|
PTFPNANG |
8.83
|
-2.76 |
-1.44 |
|
PSTPTFPN |
9.07
|
-3.18 |
-1.86 |
| P35735 |
PHFNPQSS |
6.07
|
-4.33 |
-3.01 |
|
ASPHFNPQ |
8.49
|
-4.38 |
-3.06 |
|
PLASPHFN |
8.59
|
-1.81 |
-0.49 |
|
