|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-QCF-9.PDB
Scoring matrix: BEM1-D1_JO8-QCF-9_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 16.72
Foldx random average score for Saccharomyces cerevisiae: 16.297 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1500321
Proteins after disorder filtering: 4697
Total fragments: 101170
Proteins after pattern filtering: 2225
Total fragments: 12814
Proteins after MINT filtering: 9
Total fragments: 83
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
16.72
|
-2.49 |
0.00 |
| Best peptides |
FRPRHPRY |
0.00
|
-1.49 |
1.00 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
RAPKPPSY |
12.08
|
-8.02 |
-5.53 |
|
FKLVPPQP |
12.18
|
-8.71 |
-6.22 |
|
SPGRAPKP |
12.47
|
-7.37 |
-4.88 |
| P21268 |
SKPISPPP |
11.94
|
-5.51 |
-3.02 |
|
KPISPPPS |
13.49
|
-6.69 |
-4.20 |
|
NLSKPISP |
14.44
|
-6.66 |
-4.17 |
| P11433 |
NPSATPNM |
13.80
|
-3.15 |
-0.66 |
|
SNPSATPN |
16.08
|
-1.41 |
1.08 |
| P50090 |
RIVTPTLP |
14.29
|
-8.39 |
-5.90 |
|
ALPWSPES |
14.36
|
-2.90 |
-0.41 |
|
IVTPTLPP |
14.64
|
-3.29 |
-0.80 |
| P32618 |
VPNLSPRL |
10.12
|
-7.26 |
-4.77 |
|
TNPMHPQS |
11.93
|
-5.61 |
-3.12 |
|
NPVISPYS |
12.25
|
-5.02 |
-2.53 |
| Q03497 |
FPSKNPLK |
8.93
|
-9.03 |
-6.54 |
|
GKFIPSRP |
10.60
|
-9.37 |
-6.88 |
|
APTTPNRT |
12.22
|
-8.01 |
-5.52 |
| P39969 |
QPPKSPLL |
11.12
|
-7.18 |
-4.69 |
|
RAPKPPSY |
12.08
|
-8.02 |
-5.53 |
|
SPRRAPKP |
12.21
|
-6.84 |
-4.35 |
| P22224 |
FPSTPGTI |
13.35
|
-7.17 |
-4.68 |
|
MTPSTPTF |
14.48
|
-1.62 |
0.87 |
|
IFPSTPGT |
14.57
|
-2.61 |
-0.12 |
| P35735 |
LASPHFNP |
12.62
|
-4.93 |
-2.44 |
|
SPHFNPQS |
13.36
|
-5.16 |
-2.67 |
|
