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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-8.PDB
Scoring matrix: BEM1-D1_JO8-QCF-8_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.68
Foldx random average score for Saccharomyces cerevisiae: 12.312 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1613040
Proteins after disorder filtering: 4776
Total fragments: 132085
Proteins after pattern filtering: 2300
Total fragments: 17870
Proteins after MINT filtering: 9
Total fragments: 123
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
14.68
|
-0.92 |
0.00 |
| Best peptides |
DRRFLSPM |
0.00
|
-0.25 |
0.67 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPS |
6.91
|
-5.46 |
-4.54 |
|
VQPPQSPS |
7.49
|
-3.28 |
-2.36 |
|
VPPQPGSK |
7.75
|
-4.81 |
-3.89 |
| P21268 |
LSKPISPP |
7.02
|
-3.51 |
-2.59 |
|
SKPISPPP |
8.68
|
-6.64 |
-5.72 |
|
KPISPPPS |
9.51
|
-4.89 |
-3.97 |
| P11433 |
NPSATPNM |
9.72
|
-5.15 |
-4.23 |
| P50090 |
PWSPESKN |
7.79
|
-0.21 |
0.71 |
|
VTPTLPPN |
9.02
|
-5.26 |
-4.34 |
|
TALPWSPE |
9.30
|
-1.88 |
-0.96 |
| P32618 |
PSPKPSHK |
7.42
|
-2.02 |
-1.10 |
|
ANPVISPY |
7.77
|
-2.94 |
-2.02 |
|
VGPKVPAK |
8.83
|
-5.65 |
-4.73 |
| Q03497 |
EEQPLPPI |
6.98
|
-5.72 |
-4.80 |
|
SRPAPKPP |
7.48
|
-4.84 |
-3.92 |
|
PSRPAPKP |
7.55
|
-4.00 |
-3.08 |
| P39969 |
AQPPKSPL |
5.56
|
-4.40 |
-3.48 |
|
PRRAPKPP |
5.88
|
-3.71 |
-2.79 |
|
RRAPKPPS |
6.86
|
-5.24 |
-4.32 |
| P22224 |
SPMTPSTP |
9.73
|
-2.40 |
-1.48 |
|
IFPSTPGT |
9.78
|
-3.54 |
-2.62 |
|
QSPMTPST |
9.87
|
-3.24 |
-2.32 |
| P35735 |
ASPHFNPQ |
9.52
|
-2.70 |
-1.78 |
|
SPHFNPQS |
10.78
|
-4.18 |
-3.26 |
|
LASPHFNP |
12.07
|
-3.10 |
-2.18 |
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