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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-15.PDB
Scoring matrix: BEM1-D1_JO8-QCF-15_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.78
Foldx random average score for Saccharomyces cerevisiae: 12.732 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1453435
Proteins after disorder filtering: 4076
Total fragments: 42312
Proteins after pattern filtering: 1722
Total fragments: 5496
Proteins after MINT filtering: 8
Total fragments: 42
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.78
|
-2.38 |
0.00 |
| Best peptides |
YPWRRRKRR |
0.00
|
-5.71 |
-3.33 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PQSPSFNNR |
10.37
|
-5.19 |
-2.81 |
|
FESPGRAPK |
10.74
|
-4.43 |
-2.05 |
|
VPPQPGSKK |
10.92
|
-6.27 |
-3.89 |
| P21268 |
KPISPPPSL |
10.63
|
-6.49 |
-4.11 |
| P11433 |
NPSATPNME |
12.36
|
-4.45 |
-2.07 |
| P50090 |
ALPWSPESK |
10.54
|
-4.79 |
-2.41 |
| P32618 |
TPSTSPSGR |
9.58
|
-7.41 |
-5.03 |
|
PSPKPSHKR |
10.10
|
-5.48 |
-3.10 |
|
VPAKEPSPK |
11.85
|
-5.89 |
-3.51 |
| Q03497 |
HKPKVKPSK |
7.48
|
-4.04 |
-1.66 |
|
FPSKNPLKN |
10.30
|
-7.32 |
-4.94 |
|
SFPSKNPLK |
10.77
|
-6.91 |
-4.53 |
| P39969 |
LSPIPSPTR |
9.52
|
-6.14 |
-3.76 |
|
LPPQPGSKK |
10.50
|
-7.50 |
-5.12 |
|
PEENPITSM |
10.62
|
-5.22 |
-2.84 |
| P22224 |
FPSTPGTID |
11.83
|
-5.36 |
-2.98 |
|
IFPSTPGTI |
11.94
|
-4.54 |
-2.16 |
|
