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Matrix information:
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ADAN-name: BEM1-D1_JO8-QCF-14.PDB
Scoring matrix: BEM1-D1_JO8-QCF-14_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.97
Foldx random average score for Saccharomyces cerevisiae: 13.615 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1525091
Proteins after disorder filtering: 4232
Total fragments: 48966
Proteins after pattern filtering: 1829
Total fragments: 6325
Proteins after MINT filtering: 7
Total fragments: 39
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.97
|
-2.96 |
0.00 |
| Best peptides |
IPFRIRKNL |
0.00
|
-4.80 |
-1.84 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PQSPSFNNR |
11.61
|
-6.17 |
-3.21 |
|
VPPQPGSKK |
12.09
|
-6.25 |
-3.29 |
|
KPPSYPSPV |
12.67
|
-5.46 |
-2.50 |
| P21268 |
KPISPPPSL |
11.23
|
-9.30 |
-6.34 |
| P50090 |
ALPWSPESK |
13.12
|
-5.01 |
-2.04 |
|
VTPTLPPNQ |
13.31
|
-6.61 |
-3.65 |
| P32618 |
PSPKPSHKR |
10.92
|
-6.36 |
-3.40 |
|
VPAKEPSPK |
11.43
|
-6.89 |
-3.92 |
|
DVPIVPGNN |
11.71
|
-6.72 |
-3.75 |
| Q03497 |
HKPKVKPSK |
9.32
|
-5.59 |
-2.63 |
|
KSFPSKNPL |
10.16
|
-6.62 |
-3.66 |
|
FPSKNPLKN |
11.32
|
-6.33 |
-3.37 |
| P39969 |
LSPIPSPTR |
11.00
|
-6.99 |
-4.03 |
|
QPPKSPLLN |
11.27
|
-6.71 |
-3.75 |
|
PPKSPLLNN |
11.73
|
-7.37 |
-4.41 |
| P22224 |
IFPSTPGTI |
12.01
|
-5.13 |
-2.17 |
|
TPTFPNANG |
13.04
|
-5.28 |
-2.32 |
|
