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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-7.PDB
Scoring matrix: BEM1-D1_JO8-LCK-7_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 15.52
Foldx random average score for Saccharomyces cerevisiae: 12.435 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1255378
Proteins after disorder filtering: 4671
Total fragments: 74256
Proteins after pattern filtering: 2189
Total fragments: 12369
Proteins after MINT filtering: 9
Total fragments: 82
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAA |
15.52
|
-3.54 |
0.00 |
| Best peptides |
FMPGPPRW |
0.00
|
-0.03 |
3.51 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
FKLVPPQP |
8.98
|
-7.60 |
-4.06 |
|
RAPKPPSY |
9.97
|
-5.36 |
-1.82 |
|
ESPGRAPK |
9.99
|
-2.82 |
0.72 |
| P21268 |
KPISPPPS |
11.18
|
-5.32 |
-1.78 |
|
NLSKPISP |
11.34
|
-5.81 |
-2.27 |
|
PISPPPSL |
11.54
|
-5.60 |
-2.06 |
| P11433 |
PSATPNME |
10.29
|
-6.46 |
-2.92 |
|
NPSATPNM |
12.31
|
-2.30 |
1.24 |
| P50090 |
TPTLPPNQ |
10.40
|
-5.27 |
-1.73 |
|
RIVTPTLP |
11.43
|
-6.97 |
-3.43 |
|
ALPWSPES |
11.78
|
-3.16 |
0.38 |
| P32618 |
VPNLSPRL |
10.24
|
-5.25 |
-1.71 |
|
GPKVPAKE |
10.71
|
-5.43 |
-1.89 |
|
PAPLPSHY |
10.82
|
-4.91 |
-1.37 |
| Q03497 |
FPSKNPLK |
6.92
|
-7.56 |
-4.02 |
|
GKFIPSRP |
8.98
|
-7.56 |
-4.02 |
|
APTTPNRT |
9.23
|
-6.07 |
-2.53 |
| P39969 |
FKLLPPQP |
8.79
|
-7.70 |
-4.16 |
|
PIPSPTRN |
9.25
|
-6.37 |
-2.83 |
|
RAPKPPSY |
9.97
|
-5.36 |
-1.82 |
| P22224 |
FPSTPGTI |
9.68
|
-6.58 |
-3.04 |
|
TPTFPNAN |
10.26
|
-3.15 |
0.39 |
|
YQSPMTPS |
10.27
|
-4.78 |
-1.24 |
| P35735 |
SPHFNPQS |
10.11
|
-3.35 |
0.19 |
|
PLASPHFN |
11.68
|
-5.11 |
-1.57 |
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