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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-28.PDB
Scoring matrix: BEM1-D1_JO8-LCK-28_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 16.19
Foldx random average score for Saccharomyces cerevisiae: 13.097 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3199821
Proteins after random average filtering: 7178
Total fragments: 1716876
Proteins after disorder filtering: 4346
Total fragments: 66227
Proteins after pattern filtering: 2137
Total fragments: 11928
Proteins after MINT filtering: 9
Total fragments: 85
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
16.19
|
-3.23 |
0.00 |
| Best peptides |
YPRKHRHPNR |
0.00
|
-2.51 |
0.72 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PPQSPSFNNR |
7.23
|
-9.47 |
-6.25 |
|
KPPSYPSPVQ |
8.26
|
-7.93 |
-4.71 |
|
KLVPPQPGSK |
8.44
|
-8.48 |
-5.26 |
| P21268 |
KPISPPPSLK |
6.01
|
-9.37 |
-6.14 |
|
PISPPPSLKK |
9.44
|
-8.84 |
-5.62 |
|
SKPISPPPSL |
11.17
|
-7.01 |
-3.78 |
| P11433 |
NSNPSATPNM |
10.73
|
-5.83 |
-2.61 |
| P50090 |
TPTLPPNQHR |
6.92
|
-10.20 |
-6.97 |
|
RIVTPTLPPN |
11.44
|
-10.02 |
-6.79 |
|
IVTPTLPPNQ |
11.64
|
-6.39 |
-3.16 |
| P32618 |
KEPSPKPSHK |
8.01
|
-8.93 |
-5.71 |
|
PSPKPSHKRN |
8.29
|
-8.56 |
-5.34 |
|
TPSTSPSGRR |
8.45
|
-8.32 |
-5.10 |
| Q03497 |
KPSKPEAKSK |
5.23
|
-9.29 |
-6.06 |
|
LPPIPPTKSK |
6.60
|
-10.08 |
-6.86 |
|
QPLPPIPPTK |
6.96
|
-8.94 |
-5.71 |
| P39969 |
QPPKSPLLNN |
6.80
|
-9.29 |
-6.06 |
|
KLLPPQPGSK |
8.16
|
-8.85 |
-5.63 |
|
SPEENPITSM |
8.47
|
-6.12 |
-2.90 |
| P22224 |
TPSTPTFPNA |
8.98
|
-8.45 |
-5.22 |
|
TPTFPNANGV |
9.57
|
-8.15 |
-4.93 |
|
FPSTPGTIDS |
11.47
|
-7.87 |
-4.64 |
| P35735 |
LASPHFNPQS |
10.19
|
-9.63 |
-6.41 |
|
SPHFNPQSSE |
11.34
|
-4.52 |
-1.29 |
|
PHFNPQSSEK |
12.79
|
-6.59 |
-3.36 |
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