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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-27.PDB
Scoring matrix: BEM1-D1_JO8-LCK-27_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 11.7
Foldx random average score for Saccharomyces cerevisiae: 13.636 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1595613
Proteins after disorder filtering: 4728
Total fragments: 137801
Proteins after pattern filtering: 2244
Total fragments: 15364
Proteins after MINT filtering: 9
Total fragments: 109
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
11.70
|
-2.19 |
0.00 |
| Best peptides |
MRWHDEIPK |
0.00
|
-2.37 |
-0.18 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
SPGRAPKPP |
7.68
|
-3.58 |
-1.39 |
|
KSQSNPTSP |
8.50
|
-3.69 |
-1.50 |
|
PSYPSPVQP |
9.55
|
-1.49 |
0.70 |
| P21268 |
SKPISPPPS |
9.14
|
-5.09 |
-2.90 |
|
LNLSKPISP |
10.47
|
-3.71 |
-1.52 |
|
NLSKPISPP |
11.10
|
-5.02 |
-2.83 |
| P11433 |
SNPSATPNM |
9.39
|
-0.96 |
1.23 |
|
NSNPSATPN |
9.77
|
-2.14 |
0.05 |
|
TNSNPSATP |
13.42
|
-3.33 |
-1.14 |
| P50090 |
LPWSPESKN |
10.72
|
-6.37 |
-4.18 |
|
IVTPTLPPN |
13.32
|
-4.28 |
-2.09 |
| P32618 |
VPAKEPSPK |
7.09
|
-2.84 |
-0.65 |
|
SPSNEPIQP |
7.89
|
-2.79 |
-0.60 |
|
YSPSNEPIQ |
8.27
|
-3.56 |
-1.37 |
| Q03497 |
KSFPSKNPL |
6.87
|
-4.46 |
-2.27 |
|
KQTHAPTTP |
8.37
|
-4.97 |
-2.78 |
|
KPSKPEAKS |
8.94
|
-5.58 |
-3.39 |
| P39969 |
SPRRAPKPP |
7.22
|
-3.29 |
-1.10 |
|
QPPKSPLLN |
7.52
|
-4.54 |
-2.35 |
|
SPEENPITS |
7.89
|
-1.00 |
1.19 |
| P22224 |
MTPSTPTFP |
11.36
|
-4.05 |
-1.86 |
|
NGYQSPMTP |
11.71
|
-3.10 |
-0.91 |
|
PSTPGTIDS |
12.05
|
-2.50 |
-0.31 |
| P35735 |
LASPHFNPQ |
7.96
|
-4.53 |
-2.34 |
|
ASPHFNPQS |
11.10
|
-5.77 |
-3.58 |
|
PLASPHFNP |
13.36
|
-2.91 |
-0.72 |
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