|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-LCK-25.PDB
Scoring matrix: BEM1-D1_JO8-LCK-25_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 20.14
Foldx random average score for Saccharomyces cerevisiae: 15.046 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1443448
Proteins after disorder filtering: 4522
Total fragments: 87673
Proteins after pattern filtering: 2215
Total fragments: 15580
Proteins after MINT filtering: 8
Total fragments: 107
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
20.14
|
-0.36 |
0.00 |
| Best peptides |
RFPPGREPR |
0.00
|
-0.12 |
0.24 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
FESPGRAPK |
8.70
|
-1.97 |
-1.61 |
|
IFESPGRAP |
11.64
|
-4.80 |
-4.44 |
|
PKPPSYPSP |
11.66
|
-5.37 |
-5.01 |
| P21268 |
SKPISPPPS |
12.19
|
-4.66 |
-4.30 |
|
LNLSKPISP |
12.62
|
-5.72 |
-5.36 |
|
KPISPPPSL |
14.29
|
-4.45 |
-4.09 |
| P50090 |
PTLPPNQHR |
11.14
|
-4.50 |
-4.14 |
|
IVTPTLPPN |
12.49
|
-4.02 |
-3.66 |
|
VTPTLPPNQ |
12.54
|
-7.43 |
-7.07 |
| P32618 |
DVPIVPGNN |
9.42
|
-5.25 |
-4.89 |
|
PNLSPRLSN |
9.69
|
-1.70 |
-1.34 |
|
SYSPSNEPI |
11.05
|
-3.65 |
-3.29 |
| Q03497 |
SFPSKNPLK |
8.11
|
-5.19 |
-4.83 |
|
KFIPSRPAP |
8.23
|
-2.96 |
-2.60 |
|
HKPKVKPSK |
9.66
|
-6.13 |
-5.77 |
| P39969 |
LLPPQPGSK |
10.82
|
-5.09 |
-4.73 |
|
QPPKSPLLN |
10.98
|
-4.37 |
-4.01 |
|
AQPPKSPLL |
11.38
|
-5.53 |
-5.17 |
| P22224 |
STPTFPNAN |
10.93
|
-2.68 |
-2.32 |
|
IFPSTPGTI |
11.90
|
-5.70 |
-5.34 |
|
GYQSPMTPS |
12.56
|
-4.67 |
-4.31 |
| P35735 |
PHFNPQSSE |
13.18
|
-1.73 |
-1.37 |
|
PLASPHFNP |
13.23
|
-4.75 |
-4.39 |
|
ASPHFNPQS |
14.05
|
-1.30 |
-0.94 |
|
