ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: BEM1-D1_JO8-LCK-21.PDB
Scoring matrix: BEM1-D1_JO8-LCK-21_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 13.83
Foldx random average score for Saccharomyces cerevisiae: 19.026

Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
 Proteins belonging to other specie: 1
Nš of interactions described: 42
 Interactions with other species: 2

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199821
Proteins after random average filtering: 7178
 Total fragments: 1573062
Proteins after disorder filtering: 4525
 Total fragments: 80067
Proteins after pattern filtering: 2028
 Total fragments: 7343
Proteins after MINT filtering: 8
 Total fragments: 54


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

13.83

-0.16

0.00

Best peptides

EWKFGRPHLM

0.00

3.02

3.18

         
Interactors      
P38041

VQPPQSPSFN

9.49

-3.47

-3.31

LVPPQPGSKK

10.61

-4.58

-4.42

PTSPTKQTFT

12.75

-3.16

-3.00

P11433

NSNPSATPNM

17.44

-1.96

-1.80

P50090

ALPWSPESKN

11.58

-3.70

-3.54

PTLPPNQHRG

16.36

-2.98

-2.82

TALPWSPESK

17.08

-1.58

-1.42

P32618

EPSPKPSHKR

8.45

-4.63

-4.47

EPAPLPSHYS

10.41

-2.78

-2.62

NDVPIVPGNN

11.92

-2.91

-2.75

Q03497

PKPPSSASAS

12.02

-2.64

-2.48

KFIPSRPAPK

12.66

-2.99

-2.83

RPAPKPPSSA

12.84

-1.94

-1.78

P39969

LLPPQPGSKK

9.99

-4.29

-4.13

AQPPKSPLLN

13.40

-5.77

-5.61

SPIPSPTRNS

15.19

-3.97

-3.81

P22224

PTFPNANGVD

13.03

-3.05

-2.89

PSTPGTIDSN

16.91

-0.64

-0.48

PSTPTFPNAN

17.43

-2.44

-2.28

P35735

SPHFNPQSSE

13.51

-1.31

-1.15

LASPHFNPQS

18.60

-3.00

-2.84

 


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