Matrix information:
(Help) ADAN-name: BEM1-D1_JO8-LCK-21.PDB Scoring matrix: BEM1-D1_JO8-LCK-21_mat Uniprot code: P29366 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAGGAAAA Foldx wt ligand score: 13.83 Foldx random average score for Saccharomyces cerevisiae: 19.026 Available information for P29366 in MINT (Nov 2008): Nš of interacting proteins: 16 Proteins belonging to other specie: 1 Nš of interactions described: 42 Interactions with other species: 2
Genome scanning information:
Subcellular location: True Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7178 Total fragments: 3199821 Proteins after random average filtering: 7178 Total fragments: 1573062 Proteins after disorder filtering: 4525 Total fragments: 80067 Proteins after pattern filtering: 2028 Total fragments: 7343 Proteins after MINT filtering: 8 Total fragments: 54
Prediction of know targets:
Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
Reference wt |
AAAAGGAAAA |
13.83
|
-0.16 |
0.00 |
Best peptides |
EWKFGRPHLM |
0.00
|
3.02 |
3.18 |
|
|
|
|
|
Interactors |
|
|
|
|
P38041 |
VQPPQSPSFN |
9.49
|
-3.47 |
-3.31 |
|
LVPPQPGSKK |
10.61
|
-4.58 |
-4.42 |
|
PTSPTKQTFT |
12.75
|
-3.16 |
-3.00 |
P11433 |
NSNPSATPNM |
17.44
|
-1.96 |
-1.80 |
P50090 |
ALPWSPESKN |
11.58
|
-3.70 |
-3.54 |
|
PTLPPNQHRG |
16.36
|
-2.98 |
-2.82 |
|
TALPWSPESK |
17.08
|
-1.58 |
-1.42 |
P32618 |
EPSPKPSHKR |
8.45
|
-4.63 |
-4.47 |
|
EPAPLPSHYS |
10.41
|
-2.78 |
-2.62 |
|
NDVPIVPGNN |
11.92
|
-2.91 |
-2.75 |
Q03497 |
PKPPSSASAS |
12.02
|
-2.64 |
-2.48 |
|
KFIPSRPAPK |
12.66
|
-2.99 |
-2.83 |
|
RPAPKPPSSA |
12.84
|
-1.94 |
-1.78 |
P39969 |
LLPPQPGSKK |
9.99
|
-4.29 |
-4.13 |
|
AQPPKSPLLN |
13.40
|
-5.77 |
-5.61 |
|
SPIPSPTRNS |
15.19
|
-3.97 |
-3.81 |
P22224 |
PTFPNANGVD |
13.03
|
-3.05 |
-2.89 |
|
PSTPGTIDSN |
16.91
|
-0.64 |
-0.48 |
|
PSTPTFPNAN |
17.43
|
-2.44 |
-2.28 |
P35735 |
SPHFNPQSSE |
13.51
|
-1.31 |
-1.15 |
|
LASPHFNPQS |
18.60
|
-3.00 |
-2.84 |
|