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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-20.PDB
Scoring matrix: BEM1-D1_JO8-LCK-20_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 20.3
Foldx random average score for Saccharomyces cerevisiae: 21.079 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1448686
Proteins after disorder filtering: 4596
Total fragments: 92805
Proteins after pattern filtering: 2094
Total fragments: 8947
Proteins after MINT filtering: 7
Total fragments: 68
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
20.30
|
-3.46 |
0.00 |
| Best peptides |
RRPFRGRSR |
0.00
|
-0.69 |
2.77 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VQPPQSPSF |
15.33
|
-6.35 |
-2.89 |
|
VPPQPGSKK |
16.51
|
-6.14 |
-2.68 |
|
IFESPGRAP |
16.89
|
-5.74 |
-2.28 |
| P50090 |
PTLPPNQHR |
18.72
|
-7.15 |
-3.69 |
|
RIVTPTLPP |
19.72
|
-5.92 |
-2.46 |
|
LPWSPESKN |
20.36
|
-5.51 |
-2.05 |
| P32618 |
PSPKPSHKR |
16.45
|
-7.96 |
-4.50 |
|
KEPSPKPSH |
16.85
|
-6.61 |
-3.15 |
|
KVPAKEPSP |
17.14
|
-6.64 |
-3.18 |
| Q03497 |
HKPKVKPSK |
14.69
|
-5.76 |
-2.30 |
|
PKPPSSASA |
16.94
|
-4.70 |
-1.24 |
|
APTTPNRTS |
17.46
|
-4.95 |
-1.49 |
| P39969 |
RRAPKPPSY |
14.12
|
-6.39 |
-2.93 |
|
LPPQPGSKK |
15.70
|
-6.51 |
-3.05 |
|
PEENPITSM |
17.52
|
-7.69 |
-4.23 |
| P22224 |
SPMTPSTPT |
19.91
|
-3.38 |
0.08 |
|
YQSPMTPST |
20.15
|
-4.73 |
-1.27 |
|
TPTFPNANG |
20.22
|
-4.60 |
-1.14 |
| P35735 |
PHFNPQSSE |
19.89
|
-4.81 |
-1.35 |
|
