|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-LCK-19.PDB
Scoring matrix: BEM1-D1_JO8-LCK-19_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 14.63
Foldx random average score for Saccharomyces cerevisiae: 14.214 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1501033
Proteins after disorder filtering: 4532
Total fragments: 74071
Proteins after pattern filtering: 2051
Total fragments: 8070
Proteins after MINT filtering: 7
Total fragments: 59
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
14.63
|
-0.15 |
0.00 |
| Best peptides |
DMKKRGRSF |
0.00
|
0.39 |
0.54 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VQPPQSPSF |
10.46
|
-1.00 |
-0.85 |
|
VPPQPGSKK |
10.77
|
-4.33 |
-4.18 |
|
PQSPSFNNR |
11.19
|
-6.19 |
-6.04 |
| P50090 |
PTLPPNQHR |
12.20
|
-5.13 |
-4.98 |
|
LPWSPESKN |
13.56
|
-2.33 |
-2.18 |
|
IVTPTLPPN |
14.12
|
-3.74 |
-3.59 |
| P32618 |
VPIVPGNNT |
11.24
|
-2.72 |
-2.57 |
|
KEPSPKPSH |
12.34
|
-2.43 |
-2.28 |
|
SEPAPLPSH |
12.42
|
-2.11 |
-1.96 |
| Q03497 |
PPIPPTKSK |
9.90
|
-4.39 |
-4.24 |
|
HKPKVKPSK |
10.79
|
-2.03 |
-1.88 |
|
PKPPSSASA |
10.90
|
-2.69 |
-2.54 |
| P39969 |
LPPQPGSKK |
10.70
|
-4.90 |
-4.75 |
|
APKPPSYPS |
11.33
|
-2.49 |
-2.34 |
|
AQPPKSPLL |
11.38
|
-4.15 |
-4.00 |
| P22224 |
PMTPSTPTF |
10.76
|
-2.60 |
-2.45 |
|
YQSPMTPST |
12.99
|
-4.39 |
-4.24 |
|
FPSTPGTID |
13.39
|
-1.77 |
-1.62 |
| P35735 |
LASPHFNPQ |
13.24
|
-0.39 |
-0.24 |
|
PHFNPQSSE |
13.53
|
-2.05 |
-1.90 |
|
