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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-17.PDB
Scoring matrix: BEM1-D1_JO8-LCK-17_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 19.13
Foldx random average score for Saccharomyces cerevisiae: 18.638 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1430226
Proteins after disorder filtering: 4584
Total fragments: 84872
Proteins after pattern filtering: 2030
Total fragments: 7612
Proteins after MINT filtering: 7
Total fragments: 58
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
19.13
|
-2.26 |
0.00 |
| Best peptides |
YRFMNGRSR |
0.00
|
-0.66 |
1.60 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
VQPPQSPSF |
14.33
|
-3.73 |
-1.47 |
|
YPSPVQPPQ |
15.35
|
-4.84 |
-2.58 |
|
VPPQPGSKK |
15.61
|
-5.55 |
-3.29 |
| P11433 |
SNPSATPNM |
18.06
|
-1.22 |
1.04 |
| P50090 |
LPWSPESKN |
17.01
|
-5.19 |
-2.93 |
|
PTLPPNQHR |
17.70
|
-7.65 |
-5.39 |
| P32618 |
KVPAKEPSP |
15.68
|
-4.84 |
-2.58 |
|
KEPSPKPSH |
16.11
|
-5.28 |
-3.02 |
|
PSPKPSHKR |
16.21
|
-6.69 |
-4.43 |
| Q03497 |
HKPKVKPSK |
14.13
|
-3.19 |
-0.93 |
|
THAPTTPNR |
14.72
|
-3.84 |
-1.58 |
|
PPIPPTKSK |
15.30
|
-5.62 |
-3.36 |
| P39969 |
LPPQPGSKK |
14.13
|
-6.36 |
-4.10 |
|
YPSPAQPPK |
15.79
|
-5.27 |
-3.01 |
|
AQPPKSPLL |
16.44
|
-3.31 |
-1.05 |
| P22224 |
YQSPMTPST |
13.83
|
-3.15 |
-0.89 |
|
TPSTPTFPN |
16.89
|
-3.70 |
-1.44 |
|
PMTPSTPTF |
17.18
|
-2.90 |
-0.64 |
|
