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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-14.PDB
Scoring matrix: BEM1-D1_JO8-LCK-14_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 14.84
Foldx random average score for Saccharomyces cerevisiae: 12.140 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3206999
Proteins after random average filtering: 7178
Total fragments: 1764088
Proteins after disorder filtering: 4601
Total fragments: 73672
Proteins after pattern filtering: 2045
Total fragments: 8306
Proteins after MINT filtering: 7
Total fragments: 51
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
14.84
|
-3.76 |
0.00 |
| Best peptides |
RPFGKFKKL |
0.00
|
-0.33 |
3.43 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
KPPSYPSPV |
9.32
|
-5.48 |
-1.72 |
|
VPPQPGSKK |
9.97
|
-5.17 |
-1.41 |
|
PSPVQPPQS |
10.56
|
-4.60 |
-0.84 |
| P21268 |
KPISPPPSL |
8.89
|
-6.58 |
-2.82 |
|
SKPISPPPS |
12.04
|
-4.55 |
-0.79 |
| P50090 |
TPTLPPNQH |
9.61
|
-5.91 |
-2.15 |
|
ALPWSPESK |
11.93
|
-4.02 |
-0.26 |
|
LPWSPESKN |
11.99
|
-3.22 |
0.54 |
| P32618 |
VPNLSPRLS |
8.81
|
-6.40 |
-2.64 |
|
NPVISPYSS |
9.43
|
-5.16 |
-1.40 |
|
DVPIVPGNN |
9.64
|
-4.87 |
-1.11 |
| Q03497 |
LPPIPPTKS |
7.83
|
-7.28 |
-3.52 |
|
KPSKPEAKS |
8.84
|
-3.67 |
0.09 |
|
FPSKNPLKN |
9.24
|
-6.12 |
-2.36 |
| P39969 |
PEENPITSM |
9.64
|
-5.32 |
-1.56 |
|
QPPKSPLLN |
9.65
|
-4.84 |
-1.08 |
|
LPPQPGSKK |
9.90
|
-5.05 |
-1.29 |
| P22224 |
PSTPTFPNA |
11.18
|
-4.05 |
-0.29 |
|
FPSTPGTID |
11.73
|
-3.60 |
0.16 |
|
