|
Matrix information:
(Help)
ADAN-name: BEM1-D1_JO8-LCK-13.PDB
Scoring matrix: BEM1-D1_JO8-LCK-13_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 12.04
Foldx random average score for Saccharomyces cerevisiae: 16.890 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1603824
Proteins after disorder filtering: 4794
Total fragments: 130579
Proteins after pattern filtering: 2333
Total fragments: 19316
Proteins after MINT filtering: 9
Total fragments: 125
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
12.04
|
-1.05 |
0.00 |
| Best peptides |
RPRPHPLW |
0.00
|
-0.20 |
0.85 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
KPPSYPSP |
5.58
|
-6.04 |
-4.99 |
|
APKPPSYP |
7.03
|
-5.02 |
-3.97 |
|
KLVPPQPG |
7.51
|
-4.80 |
-3.75 |
| P21268 |
KPISPPPS |
6.63
|
-5.08 |
-4.03 |
|
PISPPPSL |
9.34
|
-4.84 |
-3.79 |
|
LSKPISPP |
11.18
|
-1.99 |
-0.94 |
| P11433 |
SNPSATPN |
10.38
|
-1.53 |
-0.48 |
|
NSNPSATP |
13.52
|
-0.78 |
0.27 |
| P50090 |
LPWSPESK |
7.71
|
-5.58 |
-4.53 |
|
IVTPTLPP |
10.18
|
-1.58 |
-0.53 |
|
TALPWSPE |
11.42
|
-1.69 |
-0.64 |
| P32618 |
KEPSPKPS |
7.36
|
-3.77 |
-2.72 |
|
EPSPKPSH |
7.98
|
-5.38 |
-4.33 |
|
KSEPAPLP |
8.07
|
-2.92 |
-1.87 |
| Q03497 |
RPAPKPPS |
5.50
|
-6.87 |
-5.82 |
|
FIPSRPAP |
6.71
|
-4.97 |
-3.92 |
|
LPGSPQVS |
7.17
|
-5.90 |
-4.85 |
| P39969 |
KPPSYPSP |
5.58
|
-6.04 |
-4.99 |
|
RRAPKPPS |
5.59
|
-3.99 |
-2.94 |
|
APKPPSYP |
7.03
|
-5.02 |
-3.97 |
| P22224 |
YQSPMTPS |
9.49
|
-3.00 |
-1.95 |
|
GYQSPMTP |
10.53
|
-3.97 |
-2.92 |
|
IFPSTPGT |
10.61
|
-2.74 |
-1.69 |
| P35735 |
PLASPHFN |
8.61
|
-7.75 |
-6.70 |
|
LASPHFNP |
15.26
|
-4.18 |
-3.13 |
|
