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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-12.PDB
Scoring matrix: BEM1-D1_JO8-LCK-12_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 8.91
Foldx random average score for Saccharomyces cerevisiae: 11.069 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3214177
Proteins after random average filtering: 7178
Total fragments: 1799283
Proteins after disorder filtering: 4809
Total fragments: 120172
Proteins after pattern filtering: 2267
Total fragments: 15989
Proteins after MINT filtering: 9
Total fragments: 113
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
8.91
|
-1.18 |
0.00 |
| Best peptides |
RDAKRRFR |
0.00
|
1.02 |
2.20 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
GRAPKPPS |
6.40
|
-2.62 |
-1.44 |
|
FESPGRAP |
7.04
|
-2.50 |
-1.32 |
|
PQSPSFNN |
8.06
|
-0.21 |
0.97 |
| P21268 |
NLSKPISP |
6.10
|
-3.25 |
-2.07 |
|
PISPPPSL |
7.58
|
-1.75 |
-0.57 |
|
SKPISPPP |
8.49
|
-2.01 |
-0.83 |
| P11433 |
NPSATPNM |
9.28
|
-0.74 |
0.44 |
|
PSATPNME |
10.25
|
-2.85 |
-1.67 |
| P50090 |
STALPWSP |
6.54
|
-2.20 |
-1.02 |
|
ALPWSPES |
9.20
|
-2.14 |
-0.96 |
|
IVTPTLPP |
9.49
|
-4.14 |
-2.96 |
| P32618 |
VPAKEPSP |
7.35
|
-1.70 |
-0.52 |
|
SEPAPLPS |
7.53
|
-3.57 |
-2.39 |
|
NDVPIVPG |
7.92
|
-4.13 |
-2.95 |
| Q03497 |
KFIPSRPA |
6.83
|
-5.45 |
-4.27 |
|
RPAPKPPS |
7.25
|
-2.54 |
-1.36 |
|
PKVKPSKP |
7.26
|
-3.01 |
-1.83 |
| P39969 |
PKSPLLNN |
5.08
|
-2.64 |
-1.46 |
|
RRAPKPPS |
6.36
|
-3.59 |
-2.41 |
|
SPAQPPKS |
7.26
|
-1.88 |
-0.70 |
| P22224 |
TPSTPTFP |
7.99
|
-2.65 |
-1.47 |
|
YQSPMTPS |
9.46
|
-1.60 |
-0.42 |
|
PTFPNANG |
9.83
|
-2.43 |
-1.25 |
| P35735 |
PLASPHFN |
7.65
|
-2.38 |
-1.20 |
|
LASPHFNP |
7.85
|
-4.01 |
-2.83 |
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