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Matrix information:
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ADAN-name: BEM1-D1_JO8-LCK-11.PDB
Scoring matrix: BEM1-D1_JO8-LCK-11_mat
Uniprot code: P29366
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 15.16
Foldx random average score for Saccharomyces cerevisiae: 12.559 Available information for P29366 in MINT (Nov 2008):
Nš of interacting proteins: 16
Proteins belonging to other specie: 1
Nš of interactions described: 42
Interactions with other species: 2
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
Total fragments: 3221355
Proteins after random average filtering: 7178
Total fragments: 1302475
Proteins after disorder filtering: 4543
Total fragments: 73501
Proteins after pattern filtering: 2207
Total fragments: 12091
Proteins after MINT filtering: 9
Total fragments: 87
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
15.16
|
-1.48 |
0.00 |
| Best peptides |
FRWWPRR |
0.00
|
0.74 |
2.22 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P38041 |
PPSYPSP |
9.64
|
-6.67 |
-5.19 |
|
GRAPKPP |
10.15
|
-3.59 |
-2.11 |
|
RAPKPPS |
10.31
|
-5.24 |
-3.76 |
| P21268 |
KPISPPP |
10.19
|
-5.91 |
-4.43 |
|
SKPISPP |
11.85
|
-3.21 |
-1.73 |
|
PISPPPS |
11.95
|
-4.63 |
-3.15 |
| P11433 |
PSATPNM |
12.33
|
-4.27 |
-2.79 |
| P50090 |
TPTLPPN |
8.78
|
-5.52 |
-4.04 |
|
ALPWSPE |
10.66
|
-2.74 |
-1.26 |
|
PWSPESK |
12.45
|
-2.14 |
-0.66 |
| P32618 |
PAPLPSH |
8.35
|
-5.32 |
-3.84 |
|
PSPKPSH |
8.40
|
-3.78 |
-2.30 |
|
VPNLSPR |
8.48
|
-3.17 |
-1.69 |
| Q03497 |
FPSKNPL |
8.07
|
-5.38 |
-3.90 |
|
SRPAPKP |
8.63
|
-5.17 |
-3.69 |
|
APTTPNR |
8.73
|
-5.78 |
-4.30 |
| P39969 |
PRRAPKP |
8.79
|
-5.51 |
-4.03 |
|
RRAPKPP |
8.83
|
-3.61 |
-2.13 |
|
PIPSPTR |
9.32
|
-4.93 |
-3.45 |
| P22224 |
FPSTPGT |
9.95
|
-6.56 |
-5.08 |
|
TPTFPNA |
10.30
|
-4.69 |
-3.21 |
|
TPSTPTF |
11.01
|
-3.61 |
-2.13 |
| P35735 |
SPHFNPQ |
10.21
|
-3.58 |
-2.10 |
|
PHFNPQS |
12.06
|
-3.79 |
-2.31 |
|
ASPHFNP |
12.24
|
-3.31 |
-1.83 |
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